RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 LRRC55Q6ZSA7 311 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 SLC24A5Q71RS6 500 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 OTOP2Q7RTS6 562 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 ECHDC2Q86YB7 292 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 HERC6Q8IVU3 1022 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 C12orf56Q8IXR9 622 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 RPUSD2Q8IZ73 545 aaKnown RBP4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 TDHQ8IZJ6 230 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 FBXO15Q8NCQ5 510 aaPredicted RBP4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 CXorf38Q8TB03 319 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 PLEKHO2Q8TD55 490 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 SEPT8Q92599 483 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 CCDC51Q96ER9 411 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 CPB2Q96IY4 423 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 ZBTB45Q96K62 511 aaPredicted RBP4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 CASD1Q96PB1 797 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 ADAM2Q99965 735 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 PYM1Q9BRP8 204 aaKnown RBP4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 FUCA2Q9BTY2 467 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 TARS2Q9BW92 718 aaKnown RBP4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 FTHL17Q9BXU8 183 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 GCOM2Q9BZD3 368 aaPredicted RBP4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 INO80BQ9C086 356 aaPredicted RBP4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 C2orf40Q9H1Z8 148 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 NXF3Q9H4D5 531 aaKnown RBP4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 CWH43Q9H720 699 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 ELAC1Q9H777 363 aaKnown RBP4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 KMT5AQ9NQR1 393 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 CHST12Q9NRB3 414 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 FAM105AQ9NUU6 356 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 PANK4Q9NVE7 773 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 PRMT7Q9NVM4 692 aaPredicted RBP4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 DMAC2Q9NW81 257 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 TMEM161AQ9NX61 479 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 MIOSQ9NXC5 875 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 LARSQ9P2J5 1176 aaKnown RBP4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 MAN1B1Q9UKM7 699 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 TBX20Q9UMR3 447 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 PLAGL2Q9UPG8 496 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 GINS2Q9Y248 185 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 GDAQ9Y2T3 454 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 HES2Q9Y543 173 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 IPPQ9Y573 584 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 NUP210Q8TEM1 1887 aaPredicted RBP4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 UBE4BO95155 1302 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 PTPRJQ12913 1337 aa4.15□□□□□ -1.75
SMARCE1-215ENST00000578995 COL6A3P12111 3177 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 TTC26A0AVF1 554 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 EPOPA6NHQ4 379 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 CCDC169A6NNP5 214 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 K7ENM7 598 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 K7ERI5 159 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 M0QZ92 97 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 EFCAB14O75071 495 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 TBCAO75347 108 aaKnown RBP4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 OFD1O75665 1012 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 TOM1L1O75674 476 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 PRPF6O94906 941 aaKnown RBP4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 FAM13AO94988 1023 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 MCF2P10911 925 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 FGFR1P11362 822 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 MYOGP15173 224 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 SCP2P22307 547 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 TNFSF9P41273 254 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 ABL2P42684 1182 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 PRCPP42785 496 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 RABGGTBP53611 331 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 ASIC1P78348 528 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 SMAD3P84022 425 aaKnown RBP4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 SOX4Q06945 474 aaPredicted RBP4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 DSC1Q08554 894 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 PRPF4BQ13523 1007 aaKnown RBP4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 IKBKEQ14164 716 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 ZBTB6Q15916 424 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 NFIL3Q16649 462 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 MAPK6Q16659 721 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 CYP27C1Q4G0S4 372 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 HERC4Q5GLZ8 1057 aaPredicted RBP4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 C1orf220Q5T0J3 134 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 ZNF658Q5TYW1 1059 aaPredicted RBP4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 ATF7IP2Q5U623 682 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 CENPPQ6IPU0 288 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 SLC27A1Q6PCB7 646 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 FOXR2Q6PJQ5 311 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 OGFOD3Q6PK18 319 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 MPZL3Q6UWV2 235 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 CATSPER4Q7RTX7 472 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 NPAS4Q8IUM7 802 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 ZBTB8OSQ8IWT0 167 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 FAM178BQ8IXR5 827 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 CCDC65Q8IXS2 484 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 SMYD4Q8IYR2 804 aaPredicted RBP4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 RNF168Q8IYW5 571 aaPredicted RBP4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 ADSSL1Q8N142 457 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 GUF1Q8N442 669 aaKnown RBP4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 MYCT1Q8N699 235 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 CNNM3Q8NE01 707 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 RASSF8Q8NHQ8 419 aa4.14□□□□□ -1.75
SMARCE1-215ENST00000578995 DEPTORQ8TB45 409 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms