RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 DLGAP2Q9P1A6 1054 aa10.93□□□□□ -0.66
SS18-210ENST00000578700 ARHGAP28Q9P2N2 729 aa10.93□□□□□ -0.66
SS18-210ENST00000578700 NCDNQ9UBB6 729 aa10.93□□□□□ -0.66
SS18-210ENST00000578700 SIK3Q9Y2K2 1263 aa10.93□□□□□ -0.66
SS18-210ENST00000578700 DOCK6Q96HP0 2047 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 ARL5CA6NH57 179 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 P4HA2O15460 535 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 LAMTOR5O43504 91 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 CCDC172P0C7W6 258 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 TNNT1P13805 278 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 FSHRP23945 695 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 HOXA11P31270 313 aaPredicted RBP10.92□□□□□ -0.66
SS18-210ENST00000578700 FMO5P49326 533 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 KLK7P49862 253 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 VAMP7P51809 220 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 NTHL1P78549 312 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 CDK17Q00537 523 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 MYL7Q01449 175 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 DSG1Q02413 1049 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 CSTF1Q05048 431 aaKnown RBP10.92□□□□□ -0.66
SS18-210ENST00000578700 LAMTOR4Q0VGL1 99 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 UBXN2BQ14CS0 331 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 SPA17Q15506 151 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 SNRNP35Q16560 246 aaKnown RBP10.92□□□□□ -0.66
SS18-210ENST00000578700 TMEM132AQ24JP5 1023 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 SFMBT2Q5VUG0 894 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 RRAGAQ7L523 313 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 GRASPQ7Z6J2 395 aaPredicted RBP10.92□□□□□ -0.66
SS18-210ENST00000578700 TMEM139Q8IV31 216 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 GPD1LQ8N335 351 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 RDH13Q8NBN7 331 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 RNF149Q8NC42 400 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 SMG8Q8ND04 991 aaKnown RBP10.92□□□□□ -0.66
SS18-210ENST00000578700 PJA1Q8NG27 643 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 ASAP3Q8TDY4 903 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 SYN2Q92777 582 aaPredicted RBP10.92□□□□□ -0.66
SS18-210ENST00000578700 KCNN1Q92952 543 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 SHDQ96IW2 340 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 PPP1R13BQ96KQ4 1090 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 CCDC42Q96M95 316 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 C16orf45Q96MC5 204 aaPredicted RBP10.92□□□□□ -0.66
SS18-210ENST00000578700 ZFP42Q96MM3 310 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 SPAG5Q96R06 1193 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 CBWD1Q9BRT8 395 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 KIFC3Q9BVG8 833 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 GPR62Q9BZJ7 368 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 PRKD2Q9BZL6 878 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 TTYH3Q9C0H2 523 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 PLEKHA4Q9H4M7 779 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 RXFP1Q9HBX9 757 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 UBN1Q9NPG3 1134 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 GCNT4Q9P109 453 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 POLIQ9UNA4 740 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 PPP2R2CQ9Y2T4 447 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 IPPQ9Y573 584 aa10.92□□□□□ -0.66
SS18-210ENST00000578700 SOWAHDA6NJG2 315 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 ZNF233A6NK53 670 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 FAM170BA6NMN3 283 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 TADA2AO75478 443 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 CD72P21854 359 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 FECHP22830 423 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 AKAP5P24588 427 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 POLR2FP61218 127 aaKnown RBP10.91□□□□□ -0.66
SS18-210ENST00000578700 ENPEPQ07075 957 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 NCBP1Q09161 790 aaKnown RBP10.91□□□□□ -0.66
SS18-210ENST00000578700 HTR4Q13639 388 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 MAPK6Q16659 721 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 USP41Q3LFD5 358 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 VARS2Q5ST30 1063 aaKnown RBP10.91□□□□□ -0.66
SS18-210ENST00000578700 E4F1Q66K89 784 aaPredicted RBP10.91□□□□□ -0.66
SS18-210ENST00000578700 FUT10Q6P4F1 479 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 PARM1Q6UWI2 310 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 ZPBP2Q6X784 338 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 CEP57Q86XR8 500 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 SUMF1Q8NBK3 374 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 ATRIPQ8WXE1 791 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 CRACR2AQ9BSW2 395 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 TCHPQ9BT92 498 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 MRPL4Q9BYD3 311 aaKnown RBP10.91□□□□□ -0.66
SS18-210ENST00000578700 BCO2Q9BYV7 579 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 RHOBTB2Q9BYZ6 727 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 TRIM6Q9C030 488 aaPredicted RBP10.91□□□□□ -0.66
SS18-210ENST00000578700 ZDHHC7Q9NXF8 308 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 KLK14Q9P0G3 267 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 CACNG4Q9UBN1 327 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 PARP2Q9UGN5 583 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 MYO6Q9UM54 1294 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 MTF2Q9Y483 593 aaPredicted RBP10.91□□□□□ -0.66
SS18-210ENST00000578700 PAXBP1Q9Y5B6 917 aa10.91□□□□□ -0.66
SS18-210ENST00000578700 BZW2Q9Y6E2 419 aaKnown RBP10.91□□□□□ -0.66
SS18-210ENST00000578700 GPR179Q6PRD1 2367 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 CHD8Q9HCK8 2581 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 KANSL1LA0AUZ9 987 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 LRRC53A6NM62 1247 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 ANKRD63C9JTQ0 380 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 ANHXE9PGG2 379 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 INO80B-WBP1J3KQ70 363 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 EXTL3O43909 919 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 PIGRP01833 764 aa10.9□□□□□ -0.66
SS18-210ENST00000578700 HNRNPH3P31942 346 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms