RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 KIF4AO95239 1232 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 LMO2P25791 158 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 PAN2Q504Q3 1202 aaKnown RBP13.95□□□□□ -0.18
CTC1-203ENST00000578240 C2CD6Q53TS8 623 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 NOMO2Q5JPE7 1267 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 HABP4Q5JVS0 413 aaKnown RBP13.95□□□□□ -0.18
CTC1-203ENST00000578240 DNTTIP2Q5QJE6 756 aaKnown RBP13.95□□□□□ -0.18
CTC1-203ENST00000578240 DENND1BQ6P3S1 775 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 GLB1LQ6UWU2 654 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.95□□□□□ -0.18
CTC1-203ENST00000578240 COLGALT2Q8IYK4 626 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 C12orf29Q8N999 325 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 LRRC57Q8N9N7 239 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 C1orf131Q8NDD1 294 aaKnown RBP13.95□□□□□ -0.18
CTC1-203ENST00000578240 CPA5Q8WXQ8 436 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 RFFLQ8WZ73 363 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 ZNF592Q92610 1267 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 SENP8Q96LD8 212 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 CASD1Q96PB1 797 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 GOLPH3Q9H4A6 298 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 DNAJB4Q9UDY4 337 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 PUF60Q9UHX1 559 aaKnown RBP13.95□□□□□ -0.18
CTC1-203ENST00000578240 COLQQ9Y215 455 aaPredicted RBP13.95□□□□□ -0.18
CTC1-203ENST00000578240 COL4A4P53420 1690 aaPredicted RBP13.95□□□□□ -0.18
CTC1-203ENST00000578240 ATG2AQ2TAZ0 1938 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 I3L4J1 428 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 GABRDO14764 452 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 CD19P15391 556 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 WARSP23381 471 aaKnown RBP13.95□□□□□ -0.18
CTC1-203ENST00000578240 RPL9P32969 192 aaKnown RBP13.95□□□□□ -0.18
CTC1-203ENST00000578240 AMPD2Q01433 879 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 TIGD5Q53EQ6 642 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 KIAA0319Q5VV43 1072 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 WSCD1Q658N2 575 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 CHRDL2Q6WN34 429 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.95□□□□□ -0.18
CTC1-203ENST00000578240 TRIM72Q6ZMU5 477 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 ADGRF2Q8IZF7 708 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 MCOLN2Q8IZK6 566 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 HASPINQ8TF76 798 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 NT5C1AQ9BXI3 368 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 TJP2Q9UDY2 1190 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 GTF3C4Q9UKN8 822 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 STXBP5LQ9Y2K9 1186 aa13.95□□□□□ -0.18
CTC1-203ENST00000578240 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.95□□□□□ -0.18
CTC1-203ENST00000578240 PLXNA3P51805 1871 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 CEP290O15078 2479 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 LSM8O95777 96 aaKnown RBP13.94□□□□□ -0.18
CTC1-203ENST00000578240 TIMP1P01033 207 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 TUBB4AP04350 444 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 ATP1A1P05023 1023 aaKnown RBP13.94□□□□□ -0.18
CTC1-203ENST00000578240 CYP1A2P05177 515 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 PFKMP08237 780 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 BRCC3P46736 316 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 TCEAL1Q15170 157 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 PKDCCQ504Y2 493 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 CNKSR3Q6P9H4 555 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 ACOT1Q86TX2 421 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 UNC93AQ86WB7 457 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 PHF13Q86YI8 300 aaPredicted RBP13.94□□□□□ -0.18
CTC1-203ENST00000578240 TTC39CQ8N584 583 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 RNF10Q8N5U6 811 aaKnown RBP13.94□□□□□ -0.18
CTC1-203ENST00000578240 APPL2Q8NEU8 664 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 KIF18AQ8NI77 898 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 SLC35G2Q8TBE7 412 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 ZNF653Q96CK0 615 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 RTP3Q9BQQ7 232 aa13.94□□□□□ -0.18
CTC1-203ENST00000578240 TCRBV5S1A1TA0A578 114 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 CYB561D2O14569 222 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 ENC1O14682 589 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 MTA2O94776 668 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 MICAL2O94851 1124 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 VDRP11473 427 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 CSF2RAP15509 400 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 MMP8P22894 467 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 TKTP29401 623 aaKnown RBP13.93□□□□□ -0.18
CTC1-203ENST00000578240 HADHBP55084 474 aaKnown RBP13.93□□□□□ -0.18
CTC1-203ENST00000578240 SGO2Q562F6 1265 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 PPP1R26Q5T8A7 1209 aaPredicted RBP13.93□□□□□ -0.18
CTC1-203ENST00000578240 MMS22LQ6ZRQ5 1243 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 TTC30AQ86WT1 665 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 TXLNBQ8N3L3 684 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 TRIM58Q8NG06 486 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 OR6B3Q8NGW1 331 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 TPCN2Q8NHX9 752 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 CTNNBL1Q8WYA6 563 aaPredicted RBP13.93□□□□□ -0.18
CTC1-203ENST00000578240 UROC1Q96N76 676 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 NOX5Q96PH1 765 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 C11orf70Q9BRQ4 267 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 RC3H2Q9HBD1 1191 aaKnown RBP13.93□□□□□ -0.18
CTC1-203ENST00000578240 FAM49BQ9NUQ9 324 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 TIMM13Q9Y5L4 95 aaPredicted RBP13.93□□□□□ -0.18
CTC1-203ENST00000578240 RANBP2P49792 3224 aaKnown RBP13.93□□□□□ -0.18
CTC1-203ENST00000578240 CHD7Q9P2D1 2997 aa13.93□□□□□ -0.18
CTC1-203ENST00000578240 M0QZQ0 153 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 HUS1O60921 280 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 PALMO75781 387 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 RRM1P23921 792 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 RFC2P35250 354 aa13.92□□□□□ -0.18
CTC1-203ENST00000578240 GPD2P43304 727 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms