RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 UBE4BO95155 1302 aa17.29■□□□□ 0.36
VAPA-204ENST00000577901 SDHBP21912 280 aa17.29■□□□□ 0.36
VAPA-204ENST00000577901 SNRPFP62306 86 aaKnown RBP17.29■□□□□ 0.36
VAPA-204ENST00000577901 YWHAHQ04917 246 aaPredicted RBP17.29■□□□□ 0.36
VAPA-204ENST00000577901 GLIS3Q8NEA6 775 aa17.29■□□□□ 0.36
VAPA-204ENST00000577901 BEST2Q8NFU1 509 aa17.29■□□□□ 0.36
VAPA-204ENST00000577901 FAM213AQ9BRX8 229 aa17.29■□□□□ 0.36
VAPA-204ENST00000577901 IER2Q9BTL4 223 aa17.29■□□□□ 0.36
VAPA-204ENST00000577901 GOLPH3LQ9H4A5 285 aa17.29■□□□□ 0.36
VAPA-204ENST00000577901 LMAN1LQ9HAT1 526 aa17.29■□□□□ 0.36
VAPA-204ENST00000577901 PIAS3Q9Y6X2 628 aa17.29■□□□□ 0.36
VAPA-204ENST00000577901 CITO14578 2027 aa17.29■□□□□ 0.36
VAPA-204ENST00000577901 M0QZQ0 153 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 TULP1O00294 542 aaPredicted RBP17.28■□□□□ 0.36
VAPA-204ENST00000577901 ZNF263O14978 683 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 KLRC4O43908 158 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 EXTL3O43909 919 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 OAZ2O95190 189 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 IL18RAPO95256 599 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 TDGF1P13385 188 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 LRPAP1P30533 357 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 NRLP54845 237 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 PPP2R5DQ14738 602 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 TMEM132DQ14C87 1099 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 TEAD2Q15562 447 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 KMT5BQ4FZB7 885 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 JADE1Q6IE81 842 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 CRELD2Q6UXH1 353 aaPredicted RBP17.28■□□□□ 0.36
VAPA-204ENST00000577901 MAMSTRQ6ZN01 415 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 MFSD6LQ8IWD5 586 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 TMEM130Q8N3G9 435 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 SHKBP1Q8TBC3 707 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 SCFD1Q8WVM8 642 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 PGLYRP2Q96PD5 576 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 OXCT2Q9BYC2 517 aaPredicted RBP17.28■□□□□ 0.36
VAPA-204ENST00000577901 GPR88Q9GZN0 384 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 SLITRK6Q9H5Y7 841 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 YIPF1Q9Y548 306 aa17.28■□□□□ 0.36
VAPA-204ENST00000577901 TIMM13Q9Y5L4 95 aaPredicted RBP17.28■□□□□ 0.36
VAPA-204ENST00000577901 COL4A2P08572 1712 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 NCANO14594 1321 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 GPR179Q6PRD1 2367 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 HEPACAM2A8MVW5 462 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 VNN2O95498 520 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 RPN1P04843 607 aaKnown RBP17.27■□□□□ 0.36
VAPA-204ENST00000577901 OR4Q2P0C623 313 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 HOXD13P35453 343 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 LMNB2Q03252 620 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 PLD1Q13393 1074 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 SPATA1Q5VX52 437 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 HS2ST1Q7LGA3 356 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 NELFCDQ8IXH7 590 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 GPD1LQ8N335 351 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 NOC3LQ8WTT2 800 aaKnown RBP17.27■□□□□ 0.36
VAPA-204ENST00000577901 E2F7Q96AV8 911 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 SAAL1Q96ER3 474 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 CBWD1Q9BRT8 395 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 PCIF1Q9H4Z3 704 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 KIAA1586Q9HCI6 787 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 RBAKQ9NYW8 714 aaPredicted RBP17.27■□□□□ 0.36
VAPA-204ENST00000577901 CGNQ9P2M7 1197 aaKnown RBP17.27■□□□□ 0.36
VAPA-204ENST00000577901 C2CD2Q9Y426 696 aa17.27■□□□□ 0.36
VAPA-204ENST00000577901 PRR5-ARHGAP8B1AHC4 643 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 ARNTLO00327 626 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 CCNE1P24864 410 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 CCR3P51677 355 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 ATXN1P54253 815 aaKnown RBP17.26■□□□□ 0.35
VAPA-204ENST00000577901 ARHGAP8P85298 464 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 DUSP4Q13115 394 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 KNOP1Q1ED39 458 aaKnown RBP17.26■□□□□ 0.35
VAPA-204ENST00000577901 BMT2Q1RMZ1 405 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 DSTYKQ6XUX3 929 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 USP37Q86T82 979 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 NT5DC4Q86YG4 428 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 YAF2Q8IY57 180 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 FMR1NBQ8N0W7 255 aaPredicted RBP17.26■□□□□ 0.35
VAPA-204ENST00000577901 LRRC3Q9BY71 257 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 GMEB2Q9UKD1 530 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 CDV3Q9UKY7 258 aaKnown RBP17.26■□□□□ 0.35
VAPA-204ENST00000577901 RAB23Q9ULC3 237 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 USP18Q9UMW8 372 aa17.26■□□□□ 0.35
VAPA-204ENST00000577901 CEP250Q9BV73 2442 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 A0A1W2PRU2 124 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 GOLGA8IPA6NC78 632 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 ZNF233A6NK53 670 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 OR6C75A6NL08 312 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 GOLGA8JA6NMD2 632 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 KIF20AO95235 890 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 NFICP08651 508 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 CHRNB1P11230 501 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 TGM1P22735 817 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 PAX3P23760 479 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 AARSP49588 968 aaKnown RBP eCLIP17.25■□□□□ 0.351e-7■■□□□ 14.2
VAPA-204ENST00000577901 EPHB3P54753 998 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 FAM160A1Q05DH4 1040 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 DPYDQ12882 1025 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 STK4Q13043 487 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 TMC8Q8IU68 726 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 BRSK2Q8IWQ3 736 aa17.25■□□□□ 0.35
VAPA-204ENST00000577901 CELF5Q8N6W0 485 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms