RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 GPD1LQ8N335 351 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 RDH13Q8NBN7 331 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 RNF149Q8NC42 400 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 SMG8Q8ND04 991 aaKnown RBP10.92□□□□□ -0.66
SS18-207ENST00000577636 PJA1Q8NG27 643 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 ASAP3Q8TDY4 903 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 SYN2Q92777 582 aaPredicted RBP10.92□□□□□ -0.66
SS18-207ENST00000577636 KCNN1Q92952 543 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 SHDQ96IW2 340 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 PPP1R13BQ96KQ4 1090 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 CCDC42Q96M95 316 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 C16orf45Q96MC5 204 aaPredicted RBP10.92□□□□□ -0.66
SS18-207ENST00000577636 ZFP42Q96MM3 310 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 SPAG5Q96R06 1193 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 CBWD1Q9BRT8 395 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 KIFC3Q9BVG8 833 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 GPR62Q9BZJ7 368 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 PRKD2Q9BZL6 878 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 TTYH3Q9C0H2 523 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 PLEKHA4Q9H4M7 779 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 RXFP1Q9HBX9 757 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 UBN1Q9NPG3 1134 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 GCNT4Q9P109 453 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 POLIQ9UNA4 740 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 PPP2R2CQ9Y2T4 447 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 IPPQ9Y573 584 aa10.92□□□□□ -0.66
SS18-207ENST00000577636 C2orf16Q68DN1 1984 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 SOWAHDA6NJG2 315 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 ZNF233A6NK53 670 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 FAM170BA6NMN3 283 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 TADA2AO75478 443 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 CD72P21854 359 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 FECHP22830 423 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 AKAP5P24588 427 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 POLR2FP61218 127 aaKnown RBP10.91□□□□□ -0.66
SS18-207ENST00000577636 ENPEPQ07075 957 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 NCBP1Q09161 790 aaKnown RBP10.91□□□□□ -0.66
SS18-207ENST00000577636 HTR4Q13639 388 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 MAPK6Q16659 721 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 USP41Q3LFD5 358 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 VARS2Q5ST30 1063 aaKnown RBP10.91□□□□□ -0.66
SS18-207ENST00000577636 E4F1Q66K89 784 aaPredicted RBP10.91□□□□□ -0.66
SS18-207ENST00000577636 FUT10Q6P4F1 479 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 PARM1Q6UWI2 310 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 ZPBP2Q6X784 338 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 CEP57Q86XR8 500 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 SUMF1Q8NBK3 374 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 ATRIPQ8WXE1 791 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 CRACR2AQ9BSW2 395 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 TCHPQ9BT92 498 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 MRPL4Q9BYD3 311 aaKnown RBP10.91□□□□□ -0.66
SS18-207ENST00000577636 BCO2Q9BYV7 579 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 TRIM6Q9C030 488 aaPredicted RBP10.91□□□□□ -0.66
SS18-207ENST00000577636 ZDHHC7Q9NXF8 308 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 KLK14Q9P0G3 267 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 CACNG4Q9UBN1 327 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 PARP2Q9UGN5 583 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 MYO6Q9UM54 1294 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 MTF2Q9Y483 593 aaPredicted RBP10.91□□□□□ -0.66
SS18-207ENST00000577636 PAXBP1Q9Y5B6 917 aa10.91□□□□□ -0.66
SS18-207ENST00000577636 BZW2Q9Y6E2 419 aaKnown RBP10.91□□□□□ -0.66
SS18-207ENST00000577636 KANSL1LA0AUZ9 987 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 LRRC53A6NM62 1247 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 ANKRD63C9JTQ0 380 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 ANHXE9PGG2 379 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 INO80B-WBP1J3KQ70 363 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 EXTL3O43909 919 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 PIGRP01833 764 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 HNRNPH3P31942 346 aaKnown RBP10.9□□□□□ -0.66
SS18-207ENST00000577636 GTF2H1P32780 548 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 STARD6P59095 220 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 KCNMA1Q12791 1236 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 RAPGEF1Q13905 1077 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 CAPSQ13938 189 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 MEA1Q16626 185 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 ARHGAP29Q52LW3 1261 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 SLC44A4Q53GD3 710 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 TDRD12Q587J7 1177 aaKnown RBP10.9□□□□□ -0.66
SS18-207ENST00000577636 PDXDC1Q6P996 788 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 PRSS55Q6UWB4 352 aaPredicted RBP10.9□□□□□ -0.66
SS18-207ENST00000577636 TOGARAM2Q6ZUX3 1019 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 VPS36Q86VN1 386 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 CDR2LQ86X02 465 aaPredicted RBP10.9□□□□□ -0.66
SS18-207ENST00000577636 MAML2Q8IZL2 1156 aaPredicted RBP10.9□□□□□ -0.66
SS18-207ENST00000577636 KIF18AQ8NI77 898 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 TMC2Q8TDI7 906 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 HASPINQ8TF76 798 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 HDAC7Q8WUI4 952 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 ZNF592Q92610 1267 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 FGF14Q92915 247 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 BORCS6Q96GS4 357 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 IKZF4Q9H2S9 585 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 NLRC4Q9NPP4 1024 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 SLC2A4RGQ9NR83 387 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 CHST7Q9NS84 486 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 DLL3Q9NYJ7 618 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 FBXL5Q9UKA1 691 aa10.9□□□□□ -0.66
SS18-207ENST00000577636 EPN1Q9Y6I3 576 aaPredicted RBP10.9□□□□□ -0.66
SS18-207ENST00000577636 EP300Q09472 2414 aaPredicted RBP10.9□□□□□ -0.66
SS18-207ENST00000577636 DENND4AQ7Z401 1863 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms