RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 PPEF2O14830 753 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 TM4SF5O14894 197 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 FAM189A1O60320 539 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 ADRB2P07550 413 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 PLA2G4BP0C869 781 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 ATF6P18850 670 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 DDX6P26196 483 aaKnown RBP eCLIP12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 ABCD1P33897 745 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 MPLP40238 635 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 TMEM132DQ14C87 1099 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 KARSQ15046 597 aaKnown RBP12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 PLA2G2CQ5R387 149 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 C9orf57Q5W0N0 161 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 JADE1Q6IE81 842 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 CC2D1AQ6P1N0 951 aaPredicted RBP12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 PKN3Q6P5Z2 889 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 OR10T2Q8NGX3 314 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 SPPL2BQ8TCT7 592 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 ZC3H10Q96K80 434 aaKnown RBP12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 ZSCAN31Q96LW9 406 aaPredicted RBP12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 FAM83CQ9BQN1 747 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 MSTO1Q9BUK6 570 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 SLC46A2Q9BY10 475 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 ZCWPW1Q9H0M4 648 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 SMG9Q9H0W8 520 aaKnown RBP12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 KIF9Q9HAQ2 790 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 IL21Q9HBE4 155 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 SH2B1Q9NRF2 756 aaPredicted RBP12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 VPS45Q9NRW7 570 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 TBX20Q9UMR3 447 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 DERAQ9Y315 318 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 LAMA1P25391 3075 aa12.6□□□□□ -0.39
CTDNEP1-212ENST00000576613 TCHHQ07283 1943 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 DENND4CQ5VZ89 1909 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 K7ENM7 598 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 TRDMT1O14717 391 aaKnown RBP12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 RNF40O75150 1001 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 PIGRP01833 764 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 DRD1P21728 446 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 HOXC13P31276 330 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 ELF2Q15723 593 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 FBXO43Q4G163 708 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 RNF43Q68DV7 783 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 FSTL4Q6MZW2 842 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 GIPC2Q8TF65 315 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 PLIN2Q99541 437 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 LSM14BQ9BX40 385 aaKnown RBP12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 EBF3Q9H4W6 596 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 HPS4Q9NQG7 708 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 RXFP3Q9NSD7 469 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 TDP1Q9NUW8 608 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 ABI2Q9NYB9 513 aaPredicted RBP12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 EML5Q05BV3 1969 aa12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 ZNF638Q14966 1978 aaKnown RBP12.59□□□□□ -0.39
CTDNEP1-212ENST00000576613 A0A0B4J269 797 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 NPHP3-ACAD11A0A0J9YXS1 232 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 ANO9A1A5B4 782 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 SOBPA7XYQ1 873 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 PIRO00625 290 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 CYB561D2O14569 222 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 OBSL1O75147 1896 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 RHOBTB1O94844 696 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 KCNK5O95279 499 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 NFICP08651 508 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 TAF6P49848 677 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 ATP2C1P98194 919 aaPredicted RBP12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 PDGFRLQ15198 375 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 RILPL1Q5EBL4 403 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 TRIM68Q6AZZ1 485 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 DCP1BQ8IZD4 617 aaKnown RBP12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 MYCT1Q8N699 235 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 MAB21L3Q8N8X9 362 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 MRPS31Q92665 395 aaKnown RBP12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 USP13Q92995 863 aaPredicted RBP12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 PNMA5Q96PV4 448 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 REEP2Q9BRK0 252 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 PYM1Q9BRP8 204 aaKnown RBP12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 ASB7Q9H672 318 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 PARVGQ9HBI0 331 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 CPSF3Q9UKF6 684 aaKnown RBP12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 CCL26Q9Y258 94 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 C2CD2Q9Y426 696 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 KIF3AQ9Y496 699 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 FRYQ5TBA9 3013 aa12.58□□□□□ -0.4
CTDNEP1-212ENST00000576613 VWA3AA6NCI4 1184 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 SLC26A4O43511 780 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 FAM13AO94988 1023 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 APBB3O95704 486 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 EGFP01133 1207 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 HAPLN1P10915 354 aaPredicted RBP12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 NMT1P30419 496 aaKnown RBP12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 NLRP12P59046 1061 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 SV2CQ496J9 727 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 PLK5Q496M5 336 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 TMEM119Q4V9L6 283 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 ARSHQ5FYA8 562 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 PSAPL1Q6NUJ1 521 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 SYT13Q7L8C5 426 aa12.57□□□□□ -0.4
CTDNEP1-212ENST00000576613 CPA6Q8N4T0 437 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms