RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 PLEKHA5Q9HAU0 1116 aa19.83■□□□□ 0.77
SPNS3-204ENST00000575194 SETD4Q9NVD3 440 aa19.83■□□□□ 0.77
SPNS3-204ENST00000575194 CITO14578 2027 aa19.83■□□□□ 0.76
SPNS3-204ENST00000575194 MYADML2A6NDP7 307 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 PGK1P00558 417 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 SSTR3P32745 418 aaPredicted RBP19.82■□□□□ 0.76
SPNS3-204ENST00000575194 RBP5P82980 135 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 BEX3Q00994 111 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 MFSD10Q14728 455 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 TRADDQ15628 312 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 ZNF394Q53GI3 561 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 CCDC137Q6PK04 289 aaKnown RBP19.82■□□□□ 0.76
SPNS3-204ENST00000575194 LRIG3Q6UXM1 1119 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 ERICH1Q86X53 443 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 KATNAL2Q8IYT4 538 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 ZIM3Q96PE6 472 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 TRIM7Q9C029 511 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 DPH5Q9H2P9 285 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 ADAMTS10Q9H324 1103 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 FAM204AQ9H8W3 233 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 XPNPEP3Q9NQH7 507 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 C6orf222P0C671 652 aaPredicted RBP19.82■□□□□ 0.76
SPNS3-204ENST00000575194 CD19P15391 556 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 COILP38432 576 aaPredicted RBP19.82■□□□□ 0.76
SPNS3-204ENST00000575194 PTGIRP43119 386 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 SPDYCQ5MJ68 293 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 PHLDB2Q86SQ0 1253 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 DDX42Q86XP3 938 aaKnown RBP eCLIP19.82■□□□□ 0.76
SPNS3-204ENST00000575194 KLHDC9Q8NEP7 349 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 C18orf8Q96DM3 657 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 DDX27Q96GQ7 796 aaKnown RBP19.82■□□□□ 0.76
SPNS3-204ENST00000575194 KATNAL1Q9BW62 490 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 LRRC19Q9H756 370 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 HOMER3Q9NSC5 361 aa19.82■□□□□ 0.76
SPNS3-204ENST00000575194 MBLAC1A4D2B0 266 aaPredicted RBP19.81■□□□□ 0.76
SPNS3-204ENST00000575194 GOLGA6CA6NDK9 693 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 GOLGA6DP0CG33 693 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 RARAP10276 462 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 KIZQ2M2Z5 673 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 C2CD6Q53TS8 623 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 GNASQ5JWF2 1037 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 LLGL2Q6P1M3 1020 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 NOTUMQ6P988 496 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 SLC27A1Q6PCB7 646 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 CATSPER4Q7RTX7 472 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 CCDC105Q8IYK2 499 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 IQCKQ8N0W5 287 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 C3orf20Q8ND61 904 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 CXorf38Q8TB03 319 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 HPDLQ96IR7 371 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 FMO2Q99518 471 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.81■□□□□ 0.76
SPNS3-204ENST00000575194 UNC93B1Q9H1C4 597 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 SPC25Q9HBM1 224 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 PAK6Q9NQU5 681 aaPredicted RBP19.81■□□□□ 0.76
SPNS3-204ENST00000575194 DPP3Q9NY33 737 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 GOLGA6AQ9NYA3 693 aa19.81■□□□□ 0.76
SPNS3-204ENST00000575194 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.81■□□□□ 0.76
SPNS3-204ENST00000575194 TMEM191CA6NGB0 347 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 MEFVO15553 781 aaPredicted RBP19.8■□□□□ 0.76
SPNS3-204ENST00000575194 CYP2C9P11712 490 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 AXLP30530 894 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 RAP1GAPP47736 663 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 PSEN2P49810 448 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 RAD23BP54727 409 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 MYO1EQ12965 1108 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 MTFR1Q15390 333 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 SIX1Q15475 284 aaPredicted RBP19.8■□□□□ 0.76
SPNS3-204ENST00000575194 SGO2Q562F6 1265 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 CCSAPQ6IQ19 270 aaPredicted RBP19.8■□□□□ 0.76
SPNS3-204ENST00000575194 DCUN1D2Q6PH85 259 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 SYDE1Q6ZW31 735 aaPredicted RBP19.8■□□□□ 0.76
SPNS3-204ENST00000575194 EXD1Q8NHP7 514 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 FAM76AQ8TAV0 307 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 GRK7Q8WTQ7 553 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 TFAP2BQ92481 460 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 KAT2BQ92831 832 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 SLCO2A1Q92959 643 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 KIF12Q96FN5 646 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 FAM49AQ9H0Q0 323 aaPredicted RBP19.8■□□□□ 0.76
SPNS3-204ENST00000575194 SMYD3Q9H7B4 428 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 WDR35Q9P2L0 1181 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 AGAP1Q9UPQ3 857 aa19.8■□□□□ 0.76
SPNS3-204ENST00000575194 CILPO75339 1184 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 NPTXRO95502 500 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 ECEL1O95672 775 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 CST5P28325 142 aaPredicted RBP19.79■□□□□ 0.76
SPNS3-204ENST00000575194 YARSP54577 528 aaKnown RBP19.79■□□□□ 0.76
SPNS3-204ENST00000575194 PIGHQ14442 188 aaPredicted RBP19.79■□□□□ 0.76
SPNS3-204ENST00000575194 LRRC38Q5VT99 294 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 CCDC50Q8IVM0 306 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 RIN2Q8WYP3 895 aaPredicted RBP19.79■□□□□ 0.76
SPNS3-204ENST00000575194 RBM41Q96IZ5 413 aaKnown RBP19.79■□□□□ 0.76
SPNS3-204ENST00000575194 FRMPD3Q5JV73 1810 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 TCRBV5S1A1TA0A578 114 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 GOLGA6L10A6NI86 522 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 KPNA6O60684 536 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 GPR32O75388 356 aa19.79■□□□□ 0.76
SPNS3-204ENST00000575194 SSR1P43307 286 aaKnown RBP19.79■□□□□ 0.76
SPNS3-204ENST00000575194 GYS2P54840 703 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms