RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 CHST7Q9NS84 486 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 MARCOQ9UEW3 520 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-212ENST00000574799 ANAPC7Q9UJX3 599 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 AJAP1Q9UKB5 411 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-212ENST00000574799 BLOC1S6Q9UL45 172 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 PHF24Q9UPV7 400 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 FOXN3O00409 490 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-212ENST00000574799 CHMP2AO43633 222 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 PIAS1O75925 651 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 ITGA2BP08514 1039 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 ANPEPP15144 967 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 AMPD1P23109 780 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 ADRA1DP25100 572 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 HOXA13P31271 388 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-212ENST00000574799 EPHA7Q15375 998 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 MAP7D1Q3KQU3 841 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 LRRC6Q86X45 466 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 ANKMY2Q8IV38 441 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 SCUBE1Q8IWY4 988 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 BHMT2Q9H2M3 363 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 COL20A1Q9P218 1284 aa10.08□□□□□ -0.8
CCDC40-212ENST00000574799 HTTP42858 3142 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 PDE5AO76074 875 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 MT-ND3P03897 115 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 CYP11B2P19099 503 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 CIITAP33076 1130 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 BPIFB4P59827 614 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 PDK4Q16654 411 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 PRR16Q569H4 304 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 SATL1Q86VE3 508 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 CATSPER3Q86XQ3 398 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 PALB2Q86YC2 1186 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 PALM2Q8IXS6 379 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 ICA1LQ8NDH6 482 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 ATL2Q8NHH9 583 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 NRG4Q8WWG1 115 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 TMEM120AQ9BXJ8 343 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 KCTD10Q9H3F6 313 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 MANSC1Q9H8J5 431 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 SENP1Q9P0U3 644 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 BTBD7Q9P203 1132 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 C2CD2LO14523 706 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 MSH4O15457 936 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 ADCY3O60266 1144 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 MYL2P10916 166 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 HMGB2P26583 209 aaKnown RBP10.07□□□□□ -0.8
CCDC40-212ENST00000574799 FMO5P49326 533 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 CBX3Q13185 183 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 GIT2Q14161 759 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 USH1GQ495M9 461 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 SYDE2Q5VT97 1194 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 TRIM67Q6ZTA4 783 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 CTAGE3PQ8IX95 158 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 RFWD2Q8NHY2 731 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 SLC5A5Q92911 643 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 Q9H521 79 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 FBXO28Q9NVF7 368 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 HERC5Q9UII4 1024 aaKnown RBP10.07□□□□□ -0.8
CCDC40-212ENST00000574799 SYNPO2Q9UMS6 1093 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 COG5Q9UP83 839 aa10.07□□□□□ -0.8
CCDC40-212ENST00000574799 COQ9O75208 318 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 T-ENOLP0DO92 83 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 HARSP12081 509 aaKnown RBP10.06□□□□□ -0.8
CCDC40-212ENST00000574799 YY1P25490 414 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 ALDH18A1P54886 795 aaKnown RBP10.06□□□□□ -0.8
CCDC40-212ENST00000574799 ARHGAP4P98171 946 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 SEPT6Q14141 434 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 SLC1A5Q15758 541 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 SLC35C1Q96A29 364 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 FAM136AQ96C01 138 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 WNK4Q96J92 1243 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 CLPTM1LQ96KA5 538 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 LNPEPQ9UIQ6 1025 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 SIP14410 1827 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 UMODL1Q5DID0 1318 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 C2orf71A6NGG8 1288 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 PDXKO00764 312 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 FCHO1O14526 889 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 ZBTB39O15060 712 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 CLPTM1O96005 669 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 PTGER2P43116 358 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 PPATQ06203 517 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 PDIA2Q13087 525 aaKnown RBP10.06□□□□□ -0.8
CCDC40-212ENST00000574799 MPP3Q13368 585 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 RASA2Q15283 850 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 RTKN2Q8IZC4 609 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 SLC30A5Q8TAD4 765 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 PYDC1Q8WXC3 89 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 FIZ1Q96SL8 496 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 MIPEPQ99797 713 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 REEP2Q9BRK0 252 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 IKZF4Q9H2S9 585 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 APEX2Q9UBZ4 518 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 MTO1Q9Y2Z2 717 aaKnown RBP10.06□□□□□ -0.8
CCDC40-212ENST00000574799 NEU2Q9Y3R4 380 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 CCDC195A0A1B0GUA6 201 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 ARHGAP10A1A4S6 786 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 NDC80O14777 642 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 CYP3A4P08684 503 aa10.06□□□□□ -0.8
CCDC40-212ENST00000574799 BMP3P12645 472 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms