RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 CCDC142Q17RM4 750 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 STXBP5Q5T5C0 1151 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 VITQ6UXI7 678 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 ZNF687Q8N1G0 1237 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 CSGALNACT2Q8N6G5 542 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 KIAA0895Q8NCT3 520 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 PJA1Q8NG27 643 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 CACTINQ8WUQ7 758 aaKnown RBP18.76■□□□□ 0.59
SMG6-214ENST00000573827 LPIN3Q9BQK8 851 aa18.76■□□□□ 0.59
SMG6-214ENST00000573827 MTF2Q9Y483 593 aaPredicted RBP18.76■□□□□ 0.59
SMG6-214ENST00000573827 A0A1W2PRU2 124 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 ARNTLO00327 626 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 HCRTO43612 131 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 HAPLN1P10915 354 aaPredicted RBP18.75■□□□□ 0.59
SMG6-214ENST00000573827 NBL1P41271 181 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 ALDH1A3P47895 512 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 SNRPFP62306 86 aaKnown RBP18.75■□□□□ 0.59
SMG6-214ENST00000573827 RBP5P82980 135 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 PRKCQQ04759 706 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 SMARCB1Q12824 385 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 STK4Q13043 487 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 SNRNP35Q16560 246 aaKnown RBP18.75■□□□□ 0.59
SMG6-214ENST00000573827 SOWAHAQ2M3V2 549 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 METTL23Q86XA0 190 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 NELFCDQ8IXH7 590 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 THEM5Q8N1Q8 247 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 ZSCAN18Q8TBC5 510 aaPredicted RBP18.75■□□□□ 0.59
SMG6-214ENST00000573827 C2orf15Q8WU43 125 aaKnown RBP18.75■□□□□ 0.59
SMG6-214ENST00000573827 KBTBD7Q8WVZ9 684 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 ATOH1Q92858 354 aaPredicted RBP18.75■□□□□ 0.59
SMG6-214ENST00000573827 LRRC3BQ96PB8 259 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 IRF2BPLQ9H1B7 796 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 ZFP14Q9HCL3 533 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 SLC39A2Q9NP94 309 aa18.75■□□□□ 0.59
SMG6-214ENST00000573827 A0A1B0GVL5 298 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 CLIC2O15247 247 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 DCNP07585 359 aaKnown RBP18.74■□□□□ 0.59
SMG6-214ENST00000573827 HMGA1P17096 107 aaKnown RBP18.74■□□□□ 0.59
SMG6-214ENST00000573827 TUFMP49411 452 aaKnown RBP18.74■□□□□ 0.59
SMG6-214ENST00000573827 PFKPQ01813 784 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 FZD5Q13467 585 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 GRM2Q14416 872 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 TMEM150AQ86TG1 271 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 WDR49Q8IV35 697 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 TMEM86AQ8N2M4 240 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 TOP6BLQ8N6T0 577 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 SPATA18Q8TC71 538 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 SPPL2BQ8TCT7 592 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 PLEKHO2Q8TD55 490 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 TMEM174Q8WUU8 243 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 ACBD6Q9BR61 282 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 KIAA1586Q9HCI6 787 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 SIT1Q9Y3P8 196 aa18.74■□□□□ 0.59
SMG6-214ENST00000573827 DMXL1Q9Y485 3027 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 KANSL1LA0AUZ9 987 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 TMEM191BP0C7N4 346 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 CYP24A1Q07973 514 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 BFSP1Q12934 665 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 PSMD6Q15008 389 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 ANGPT1Q15389 498 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 SURF1Q15526 300 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 KNOP1Q1ED39 458 aaKnown RBP18.73■□□□□ 0.59
SMG6-214ENST00000573827 DUOXA2Q1HG44 320 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 INTS6LQ5JSJ4 861 aaKnown RBP18.73■□□□□ 0.59
SMG6-214ENST00000573827 XXYLT1Q8NBI6 393 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 NOC3LQ8WTT2 800 aaKnown RBP18.73■□□□□ 0.59
SMG6-214ENST00000573827 ZNF516Q92618 1163 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 DNASE1L2Q92874 299 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 SHDQ96IW2 340 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 SEPT5Q99719 369 aaPredicted RBP18.73■□□□□ 0.59
SMG6-214ENST00000573827 GPR88Q9GZN0 384 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 TRPV5Q9NQA5 729 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 DMAC2Q9NW81 257 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 NME7Q9Y5B8 376 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 SNX9Q9Y5X1 595 aa18.73■□□□□ 0.59
SMG6-214ENST00000573827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.72■□□□□ 0.59
SMG6-214ENST00000573827 HUS1O60921 280 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 CD72P21854 359 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 ACAT1P24752 427 aaKnown RBP18.72■□□□□ 0.59
SMG6-214ENST00000573827 WEE1P30291 646 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 GPR15P49685 360 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 MGAT5BQ3V5L5 792 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 TRAPPC11Q7Z392 1133 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 ITIH5Q86UX2 942 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 DCP1BQ8IZD4 617 aaKnown RBP18.72■□□□□ 0.59
SMG6-214ENST00000573827 MAML2Q8IZL2 1156 aaPredicted RBP18.72■□□□□ 0.59
SMG6-214ENST00000573827 HPDLQ96IR7 371 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 ANKRD36BP1Q96IX9 119 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 SPATA32Q96LK8 384 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 CGRRF1Q99675 332 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 OSBPL6Q9BZF3 934 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 KCTD10Q9H3F6 313 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 LTB4R2Q9NPC1 389 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 HEBP1Q9NRV9 189 aa18.72■□□□□ 0.59
SMG6-214ENST00000573827 DDX43Q9NXZ2 648 aaKnown RBP18.72■□□□□ 0.59
SMG6-214ENST00000573827 ABI2Q9NYB9 513 aaPredicted RBP18.72■□□□□ 0.59
SMG6-214ENST00000573827 HEPACAM2A8MVW5 462 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 CST3P01034 146 aaPredicted RBP18.71■□□□□ 0.59
SMG6-214ENST00000573827 KRT19P08727 400 aa18.71■□□□□ 0.59
SMG6-214ENST00000573827 PSMC3P17980 439 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms