RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 OBSL1O75147 1896 aa18.64■□□□□ 0.57
SMG6-212ENST00000573153 NUP210Q8TEM1 1887 aaPredicted RBP18.63■□□□□ 0.57
SMG6-212ENST00000573153 A0A1W2PRU2 124 aa18.63■□□□□ 0.57
SMG6-212ENST00000573153 PROB1E7EW31 1015 aa18.63■□□□□ 0.57
SMG6-212ENST00000573153 CLIC2O15247 247 aa18.63■□□□□ 0.57
SMG6-212ENST00000573153 HAPLN1P10915 354 aaPredicted RBP18.63■□□□□ 0.57
SMG6-212ENST00000573153 VIPR2P41587 438 aa18.63■□□□□ 0.57
SMG6-212ENST00000573153 SNW1Q13573 536 aaKnown RBP18.63■□□□□ 0.57
SMG6-212ENST00000573153 MLF2Q15773 248 aaPredicted RBP18.63■□□□□ 0.57
SMG6-212ENST00000573153 SOWAHAQ2M3V2 549 aa18.63■□□□□ 0.57
SMG6-212ENST00000573153 IQCEQ6IPM2 695 aa18.63■□□□□ 0.57
SMG6-212ENST00000573153 DTWD2Q8NBA8 298 aa18.63■□□□□ 0.57
SMG6-212ENST00000573153 PJA1Q8NG27 643 aa18.63■□□□□ 0.57
SMG6-212ENST00000573153 LRRC3BQ96PB8 259 aa18.63■□□□□ 0.57
SMG6-212ENST00000573153 GOLPH3LQ9H4A5 285 aa18.63■□□□□ 0.57
SMG6-212ENST00000573153 KIAA1586Q9HCI6 787 aa18.63■□□□□ 0.57
SMG6-212ENST00000573153 CGNQ9P2M7 1197 aaKnown RBP18.63■□□□□ 0.57
SMG6-212ENST00000573153 PATJQ8NI35 1801 aa18.63■□□□□ 0.57
SMG6-212ENST00000573153 A0A1W2PQ27 194 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 A0A1W2PQ64 194 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 A0A1W2PQD8 194 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 ZNF233A6NK53 670 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 PRR29P0C7W0 189 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 HMGA1P17096 107 aaKnown RBP18.62■□□□□ 0.57
SMG6-212ENST00000573153 GPR15P49685 360 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 CYP24A1Q07973 514 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 PLD1Q13393 1074 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 GRM2Q14416 872 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 PSMD6Q15008 389 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 SNRNP35Q16560 246 aaKnown RBP18.62■□□□□ 0.57
SMG6-212ENST00000573153 SLC44A4Q53GD3 710 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 INTS6LQ5JSJ4 861 aaKnown RBP18.62■□□□□ 0.57
SMG6-212ENST00000573153 CYP4A22Q5TCH4 519 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 WDR49Q8IV35 697 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 CSGALNACT2Q8N6G5 542 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 ZSCAN18Q8TBC5 510 aaPredicted RBP18.62■□□□□ 0.57
SMG6-212ENST00000573153 CACTINQ8WUQ7 758 aaKnown RBP18.62■□□□□ 0.57
SMG6-212ENST00000573153 TMEM174Q8WUU8 243 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 SMARCD2Q92925 531 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 KCTD10Q9H3F6 313 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 DENND4CQ5VZ89 1909 aa18.62■□□□□ 0.57
SMG6-212ENST00000573153 TADA3O75528 432 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 CST3P01034 146 aaPredicted RBP18.61■□□□□ 0.57
SMG6-212ENST00000573153 DCNP07585 359 aaKnown RBP18.61■□□□□ 0.57
SMG6-212ENST00000573153 TMEM191BP0C7N4 346 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 ACAT1P24752 427 aaKnown RBP18.61■□□□□ 0.57
SMG6-212ENST00000573153 NBL1P41271 181 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 PRKCQQ04759 706 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 BFSP1Q12934 665 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 SURF1Q15526 300 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 KMT5BQ4FZB7 885 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 MAML2Q8IZL2 1156 aaPredicted RBP18.61■□□□□ 0.57
SMG6-212ENST00000573153 ELMOD1Q8N336 334 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 TOP6BLQ8N6T0 577 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 STKLD1Q8NE28 680 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 SPATA18Q8TC71 538 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 SPPL2BQ8TCT7 592 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 C2orf15Q8WU43 125 aaKnown RBP18.61■□□□□ 0.57
SMG6-212ENST00000573153 CGRRF1Q99675 332 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 ACBD6Q9BR61 282 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 DMAC2Q9NW81 257 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 ASB3Q9Y575 518 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 SNX9Q9Y5X1 595 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 PTPRDP23468 1912 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 TICRRQ7Z2Z1 1910 aa18.61■□□□□ 0.57
SMG6-212ENST00000573153 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.6■□□□□ 0.57
SMG6-212ENST00000573153 TARSP26639 723 aaKnown RBP18.6■□□□□ 0.57
SMG6-212ENST00000573153 ALDH1A3P47895 512 aa18.6■□□□□ 0.57
SMG6-212ENST00000573153 NDUFA8P51970 172 aa18.6■□□□□ 0.57
SMG6-212ENST00000573153 EPHB3P54753 998 aa18.6■□□□□ 0.57
SMG6-212ENST00000573153 RBP5P82980 135 aa18.6■□□□□ 0.57
SMG6-212ENST00000573153 SMARCB1Q12824 385 aa18.6■□□□□ 0.57
SMG6-212ENST00000573153 PSMD2Q13200 908 aa18.6■□□□□ 0.57
SMG6-212ENST00000573153 ANGPT1Q15389 498 aa18.6■□□□□ 0.57
SMG6-212ENST00000573153 KNOP1Q1ED39 458 aaKnown RBP18.6■□□□□ 0.57
SMG6-212ENST00000573153 TRAPPC11Q7Z392 1133 aa18.6■□□□□ 0.57
SMG6-212ENST00000573153 METTL23Q86XA0 190 aa18.6■□□□□ 0.57
SMG6-212ENST00000573153 XXYLT1Q8NBI6 393 aa18.6■□□□□ 0.57
SMG6-212ENST00000573153 DNASE1L2Q92874 299 aa18.6■□□□□ 0.57
SMG6-212ENST00000573153 SEPT5Q99719 369 aaPredicted RBP18.6■□□□□ 0.57
SMG6-212ENST00000573153 XYLT2Q9H1B5 865 aa18.6■□□□□ 0.57
SMG6-212ENST00000573153 ZFP14Q9HCL3 533 aa18.6■□□□□ 0.57
SMG6-212ENST00000573153 DDX43Q9NXZ2 648 aaKnown RBP18.6■□□□□ 0.57
SMG6-212ENST00000573153 MIA3Q5JRA6 1907 aa18.6■□□□□ 0.57
SMG6-212ENST00000573153 KANSL1LA0AUZ9 987 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 PRAMEF12O95522 483 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 F11P03951 625 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 CD72P21854 359 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 SYKP43405 635 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 TUFMP49411 452 aaKnown RBP18.59■□□□□ 0.57
SMG6-212ENST00000573153 CYP2J2P51589 502 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 CLDN10P78369 228 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 FCHO2Q0JRZ9 810 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 MGAT5BQ3V5L5 792 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 WDR44Q5JSH3 913 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 FAM171BQ6P995 826 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 ADGRF2Q8IZF7 708 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 THEM5Q8N1Q8 247 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 TMEM86AQ8N2M4 240 aa18.59■□□□□ 0.57
SMG6-212ENST00000573153 RDH13Q8NBN7 331 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms