RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 ARHGEF3Q9NR81 526 aa19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 GDAP2Q9NXN4 497 aa19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 CGNQ9P2M7 1197 aaKnown RBP19.1■□□□□ 0.65
CTDNEP1-207ENST00000572043 ANK1P16157 1881 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 GOLGA6L4A6NEF3 574 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 CLSTN1O94985 981 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 CST3P01034 146 aaPredicted RBP19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 ATF6P18850 670 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 TUFMP49411 452 aaKnown RBP19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 GPR15P49685 360 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 EPHA5P54756 1037 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 MYL7Q01449 175 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 GRM2Q14416 872 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 VEPH1Q14D04 833 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 STXBP5Q5T5C0 1151 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 TMEM86AQ8N2M4 240 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 TOP6BLQ8N6T0 577 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 LEMD2Q8NC56 503 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 STKLD1Q8NE28 680 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 PLEKHO2Q8TD55 490 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 ZNF516Q92618 1163 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 PSMG2Q969U7 264 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 MMS19Q96T76 1030 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 LRRC3Q9BY71 257 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 GZF1Q9H116 711 aaPredicted RBP19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 KCNH6Q9H252 994 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 KCTD10Q9H3F6 313 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 SLC2A4RGQ9NR83 387 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 GTF3C4Q9UKN8 822 aa19.09■□□□□ 0.65
CTDNEP1-207ENST00000572043 PHACTR2O75167 634 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 PRPF40AO75400 957 aaKnown RBP19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 ECI2O75521 394 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 NR3C1P04150 777 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 HAPLN1P10915 354 aaPredicted RBP19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 FCARP24071 287 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 VIPR2P41587 438 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 NHLH1Q02575 133 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 TCF15Q12870 199 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 TRPC3Q13507 836 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 SNW1Q13573 536 aaKnown RBP19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 TAF12Q16514 161 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 INTS6LQ5JSJ4 861 aaKnown RBP19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 SDHAF4Q5VUM1 108 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 CEP135Q66GS9 1140 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 ITIH5Q86UX2 942 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 ZSCAN18Q8TBC5 510 aaPredicted RBP19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 SPPL2BQ8TCT7 592 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 C2orf15Q8WU43 125 aaKnown RBP19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 ASB16Q96NS5 453 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 ACBD6Q9BR61 282 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 ATXN3LQ9H3M9 355 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 TBC1D17Q9HA65 648 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 ZFP14Q9HCL3 533 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 PCDHB5Q9Y5E4 795 aa19.08■□□□□ 0.64
CTDNEP1-207ENST00000572043 TSC2P49815 1807 aa19.07■□□□□ 0.64
CTDNEP1-207ENST00000572043 ATP2C2O75185 946 aa19.07■□□□□ 0.64
CTDNEP1-207ENST00000572043 MICAL2O94851 1124 aa19.07■□□□□ 0.64
CTDNEP1-207ENST00000572043 RHOBTB3O94955 611 aa19.07■□□□□ 0.64
CTDNEP1-207ENST00000572043 PDGFRBP09619 1106 aa19.07■□□□□ 0.64
CTDNEP1-207ENST00000572043 GABRR2P28476 465 aa19.07■□□□□ 0.64
CTDNEP1-207ENST00000572043 CLCN5P51795 746 aa19.07■□□□□ 0.64
CTDNEP1-207ENST00000572043 PSMC1P62191 440 aaKnown RBP19.07■□□□□ 0.64
CTDNEP1-207ENST00000572043 SMARCB1Q12824 385 aa19.07■□□□□ 0.64
CTDNEP1-207ENST00000572043 BIRC3Q13489 604 aa19.07■□□□□ 0.64
CTDNEP1-207ENST00000572043 ELSPBP1Q96BH3 223 aa19.07■□□□□ 0.64
CTDNEP1-207ENST00000572043 ELMO3Q96BJ8 720 aa19.07■□□□□ 0.64
CTDNEP1-207ENST00000572043 HSFX1Q9UBD0 423 aa19.07■□□□□ 0.64
CTDNEP1-207ENST00000572043 ASB3Q9Y575 518 aa19.07■□□□□ 0.64
CTDNEP1-207ENST00000572043 MYBPHLA2RUH7 354 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 LRRIQ3A6PVS8 624 aaPredicted RBP19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 CALUO43852 315 aaPredicted RBP19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 AOC1P19801 751 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 CYP2F1P24903 491 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 LMO2P25791 158 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 LHX1P48742 406 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 PTPN5P54829 565 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 MYL6P60660 151 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 CYP4F8P98187 520 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 PNOCQ13519 176 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 NFE2Q16621 373 aaPredicted RBP19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 GAREM2Q75VX8 874 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 SMYD4Q8IYR2 804 aaPredicted RBP19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 KBTBD7Q8WVZ9 684 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 SMARCD2Q92925 531 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 PRRX2Q99811 253 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 SYT15Q9BQS2 421 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 MRPL45Q9BRJ2 306 aaKnown RBP19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 FOXQ1Q9C009 403 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 FAM86C1Q9NVL1 165 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 DMAC2Q9NW81 257 aa19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 NXF1Q9UBU9 619 aaKnown RBP19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 MAGED2Q9UNF1 606 aaPredicted RBP19.06■□□□□ 0.64
CTDNEP1-207ENST00000572043 SCN1AP35498 2009 aa19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 H0Y858 1186 aa19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 PDXKO00764 312 aa19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 GABRDO14764 452 aa19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 PCSK1P29120 753 aa19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 TNNC1P63316 161 aa19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 DLG4P78352 724 aa19.05■□□□□ 0.64
CTDNEP1-207ENST00000572043 DDR2Q16832 855 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms