RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 VWA3AA6NCI4 1184 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 ANKRD63C9JTQ0 380 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 HNRNPDLO14979 420 aaKnown RBP20.77■□□□□ 0.92
NUP88-203ENST00000572019 EGFP01133 1207 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 PIGRP01833 764 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 ARSAP15289 507 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 PMLP29590 882 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 RAP1GAPP47736 663 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 GPR15P49685 360 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 MCM2P49736 904 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 ARHGAP15Q53QZ3 475 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 TMEM196Q5HYL7 178 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 SCARA3Q6AZY7 606 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 TCEAL6Q6IPX3 200 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 ARMCX5Q6P1M9 558 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 USP13Q92995 863 aaPredicted RBP20.77■□□□□ 0.92
NUP88-203ENST00000572019 TCEAL3Q969E4 200 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 FIZ1Q96SL8 496 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 TMLHEQ9NVH6 421 aa20.77■□□□□ 0.92
NUP88-203ENST00000572019 RPP40O75818 363 aaKnown RBP20.76■□□□□ 0.91
NUP88-203ENST00000572019 EPN2O95208 641 aa20.76■□□□□ 0.91
NUP88-203ENST00000572019 CYP11A1P05108 521 aa20.76■□□□□ 0.91
NUP88-203ENST00000572019 HMGA1P17096 107 aaKnown RBP20.76■□□□□ 0.91
NUP88-203ENST00000572019 WEE1P30291 646 aa20.76■□□□□ 0.91
NUP88-203ENST00000572019 ACOT2P49753 483 aa20.76■□□□□ 0.91
NUP88-203ENST00000572019 DHX8Q14562 1220 aaKnown RBP20.76■□□□□ 0.91
NUP88-203ENST00000572019 WSCD1Q658N2 575 aa20.76■□□□□ 0.91
NUP88-203ENST00000572019 ITIH5Q86UX2 942 aa20.76■□□□□ 0.91
NUP88-203ENST00000572019 EZH1Q92800 747 aaPredicted RBP20.76■□□□□ 0.91
NUP88-203ENST00000572019 KCNN1Q92952 543 aa20.76■□□□□ 0.91
NUP88-203ENST00000572019 MSTO1Q9BUK6 570 aa20.76■□□□□ 0.91
NUP88-203ENST00000572019 K7ENM7 598 aa20.75■□□□□ 0.91
NUP88-203ENST00000572019 ZNF806P0C7X5 589 aa20.75■□□□□ 0.91
NUP88-203ENST00000572019 LIMK1P53667 647 aa20.75■□□□□ 0.91
NUP88-203ENST00000572019 PLCB2Q00722 1185 aa20.75■□□□□ 0.91
NUP88-203ENST00000572019 PLA2G2CQ5R387 149 aa20.75■□□□□ 0.91
NUP88-203ENST00000572019 SDHAF4Q5VUM1 108 aa20.75■□□□□ 0.91
NUP88-203ENST00000572019 IL31Q6EBC2 164 aa20.75■□□□□ 0.91
NUP88-203ENST00000572019 CMTM8Q8IZV2 173 aa20.75■□□□□ 0.91
NUP88-203ENST00000572019 SYNPOQ8N3V7 929 aa20.75■□□□□ 0.91
NUP88-203ENST00000572019 MAB21L3Q8N8X9 362 aa20.75■□□□□ 0.91
NUP88-203ENST00000572019 HHIPQ96QV1 700 aa20.75■□□□□ 0.91
NUP88-203ENST00000572019 BLOC1S4Q9NUP1 217 aa20.75■□□□□ 0.91
NUP88-203ENST00000572019 ABI2Q9NYB9 513 aaPredicted RBP20.75■□□□□ 0.91
NUP88-203ENST00000572019 LARSQ9P2J5 1176 aaKnown RBP20.75■□□□□ 0.91
NUP88-203ENST00000572019 HSFX1Q9UBD0 423 aa20.75■□□□□ 0.91
NUP88-203ENST00000572019 CACNA1GO43497 2377 aa20.75■□□□□ 0.91
NUP88-203ENST00000572019 PTPRDP23468 1912 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 ANTXRLA6NF34 631 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 CYB561D2O14569 222 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 XPOTO43592 962 aaKnown RBP20.74■□□□□ 0.91
NUP88-203ENST00000572019 RNF40O75150 1001 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 FGF19O95750 216 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 F11P03951 625 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 HAPLN1P10915 354 aaPredicted RBP20.74■□□□□ 0.91
NUP88-203ENST00000572019 CDC25CP30307 473 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 WNT7BP56706 349 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 NLRP12P59046 1061 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 RUNX3Q13761 415 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 TMEM132DQ14C87 1099 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 CCDC142Q17RM4 750 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 STPG1Q5TH74 334 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 TXNDC8Q6A555 127 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 GPBP1Q86WP2 473 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 EFCAB13Q8IY85 973 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 FAM84AQ96KN4 292 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 PYM1Q9BRP8 204 aaKnown RBP20.74■□□□□ 0.91
NUP88-203ENST00000572019 KCND2Q9NZV8 630 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 THADAQ6YHU6 1953 aa20.74■□□□□ 0.91
NUP88-203ENST00000572019 HELZP42694 1942 aaKnown RBP20.73■□□□□ 0.91
NUP88-203ENST00000572019 CEP295Q9C0D2 2601 aa20.73■□□□□ 0.91
NUP88-203ENST00000572019 TRDMT1O14717 391 aaKnown RBP20.73■□□□□ 0.91
NUP88-203ENST00000572019 DCLK1O15075 740 aa20.73■□□□□ 0.91
NUP88-203ENST00000572019 TADA3O75528 432 aa20.73■□□□□ 0.91
NUP88-203ENST00000572019 TUFMP49411 452 aaKnown RBP20.73■□□□□ 0.91
NUP88-203ENST00000572019 ZNF131P52739 623 aa20.73■□□□□ 0.91
NUP88-203ENST00000572019 GRIN1Q05586 938 aa20.73■□□□□ 0.91
NUP88-203ENST00000572019 VEPH1Q14D04 833 aa20.73■□□□□ 0.91
NUP88-203ENST00000572019 ZC2HC1CQ53FD0 456 aaPredicted RBP20.73■□□□□ 0.91
NUP88-203ENST00000572019 MCTP1Q6DN14 999 aa20.73■□□□□ 0.91
NUP88-203ENST00000572019 CACNA2D4Q7Z3S7 1137 aa20.73■□□□□ 0.91
NUP88-203ENST00000572019 MYCT1Q8N699 235 aa20.73■□□□□ 0.91
NUP88-203ENST00000572019 C12orf50Q8NA57 414 aaPredicted RBP20.73■□□□□ 0.91
NUP88-203ENST00000572019 ZSCAN31Q96LW9 406 aaPredicted RBP20.73■□□□□ 0.91
NUP88-203ENST00000572019 KCNG1Q9UIX4 513 aa20.73■□□□□ 0.91
NUP88-203ENST00000572019 CCDC192P0DO97 292 aa20.72■□□□□ 0.91
NUP88-203ENST00000572019 MCM6Q14566 821 aa20.72■□□□□ 0.91
NUP88-203ENST00000572019 LOXL4Q96JB6 756 aa20.72■□□□□ 0.91
NUP88-203ENST00000572019 SLC22A12Q96S37 553 aa20.72■□□□□ 0.91
NUP88-203ENST00000572019 SH2B1Q9NRF2 756 aaPredicted RBP20.72■□□□□ 0.91
NUP88-203ENST00000572019 ANGPTL2Q9UKU9 493 aa20.72■□□□□ 0.91
NUP88-203ENST00000572019 ODF2LQ9ULJ1 636 aa20.72■□□□□ 0.91
NUP88-203ENST00000572019 H0YCG3 227 aa20.71■□□□□ 0.91
NUP88-203ENST00000572019 FAM13AO94988 1023 aa20.71■□□□□ 0.91
NUP88-203ENST00000572019 MPLP40238 635 aa20.71■□□□□ 0.91
NUP88-203ENST00000572019 GALK1P51570 392 aa20.71■□□□□ 0.91
NUP88-203ENST00000572019 KYAT1Q16773 422 aa20.71■□□□□ 0.91
NUP88-203ENST00000572019 PLK5Q496M5 336 aa20.71■□□□□ 0.91
NUP88-203ENST00000572019 CRELD2Q6UXH1 353 aaPredicted RBP20.71■□□□□ 0.91
NUP88-203ENST00000572019 ZSWIM2Q8NEG5 633 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms