RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 CD58P19256 250 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 CTNNA1P35221 906 aaKnown RBP18.4■□□□□ 0.54
RPAIN-208ENST00000571043 SLC1A1P43005 524 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 PLA2G4AP47712 749 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 RBP5P82980 135 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 NOTUMQ6P988 496 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 ALG3Q92685 438 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 RNPC3Q96LT9 517 aaKnown RBP18.4■□□□□ 0.54
RPAIN-208ENST00000571043 HTATIP2Q9BUP3 242 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 SLITRK6Q9H5Y7 841 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 GDF3Q9NR23 364 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 CHST12Q9NRB3 414 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 PCDHA3Q9Y5H8 950 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 SCINQ9Y6U3 715 aa18.4■□□□□ 0.54
RPAIN-208ENST00000571043 MYH10P35580 1976 aa18.39■□□□□ 0.54
RPAIN-208ENST00000571043 SPOPO43791 374 aa18.39■□□□□ 0.54
RPAIN-208ENST00000571043 ZMYND10O75800 440 aa18.39■□□□□ 0.54
RPAIN-208ENST00000571043 FGGP02679 453 aa18.39■□□□□ 0.54
RPAIN-208ENST00000571043 CFHP08603 1231 aa18.39■□□□□ 0.54
RPAIN-208ENST00000571043 CD52P31358 61 aa18.39■□□□□ 0.54
RPAIN-208ENST00000571043 CDH5P33151 784 aaPredicted RBP18.39■□□□□ 0.54
RPAIN-208ENST00000571043 CCL23P55773 120 aa18.39■□□□□ 0.54
RPAIN-208ENST00000571043 SLC7A5Q01650 507 aa18.39■□□□□ 0.54
RPAIN-208ENST00000571043 PTP4A2Q12974 167 aa18.39■□□□□ 0.54
RPAIN-208ENST00000571043 NFX1Q12986 1120 aaKnown RBP18.39■□□□□ 0.54
RPAIN-208ENST00000571043 CASP8Q14790 479 aa18.39■□□□□ 0.54
RPAIN-208ENST00000571043 PLEKHA7Q6IQ23 1121 aa18.39■□□□□ 0.54
RPAIN-208ENST00000571043 FAM43BQ6ZT52 329 aaPredicted RBP18.39■□□□□ 0.54
RPAIN-208ENST00000571043 TMEM35BQ8NCS4 154 aa18.39■□□□□ 0.54
RPAIN-208ENST00000571043 NXF1Q9UBU9 619 aaKnown RBP18.39■□□□□ 0.54
RPAIN-208ENST00000571043 ANAPC7Q9UJX3 599 aa18.39■□□□□ 0.54
RPAIN-208ENST00000571043 POLIQ9UNA4 740 aa18.39■□□□□ 0.54
RPAIN-208ENST00000571043 HEXIM1O94992 359 aaKnown RBP18.39■□□□□ 0.53
RPAIN-208ENST00000571043 NPTXRO95502 500 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 CXCL10P02778 98 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 CALB1P05937 261 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 MMP8P22894 467 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 ITGB8P26012 769 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 CBX1P83916 185 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 PAK2Q13177 524 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 WDR72Q3MJ13 1102 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 SCARA5Q6ZMJ2 495 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 PASD1Q8IV76 773 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 TTC39CQ8N584 583 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 EIF1ADQ8N9N8 165 aaKnown RBP18.39■□□□□ 0.53
RPAIN-208ENST00000571043 AENQ8WTP8 325 aaKnown RBP18.39■□□□□ 0.53
RPAIN-208ENST00000571043 KRT35Q92764 455 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 SCLYQ96I15 445 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 BTBD6Q96KE9 485 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 C11orf70Q9BRQ4 267 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 AP1M1Q9BXS5 423 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 UBXN6Q9BZV1 441 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 VIPAS39Q9H9C1 493 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 PRDM5Q9NQX1 630 aaPredicted RBP18.39■□□□□ 0.53
RPAIN-208ENST00000571043 LCMT1Q9UIC8 334 aa18.39■□□□□ 0.53
RPAIN-208ENST00000571043 GOLGA6L10A0A0M3HER8 536 aa18.38■□□□□ 0.53
RPAIN-208ENST00000571043 MYO1FO00160 1098 aa18.38■□□□□ 0.53
RPAIN-208ENST00000571043 RAD51CO43502 376 aa18.38■□□□□ 0.53
RPAIN-208ENST00000571043 MED7O43513 233 aa18.38■□□□□ 0.53
RPAIN-208ENST00000571043 BRD2P25440 801 aaKnown RBP18.38■□□□□ 0.53
RPAIN-208ENST00000571043 POLR2BP30876 1174 aaKnown RBP18.38■□□□□ 0.53
RPAIN-208ENST00000571043 PLEKHG4Q58EX7 1191 aa18.38■□□□□ 0.53
RPAIN-208ENST00000571043 SEL1L2Q5TEA6 688 aa18.38■□□□□ 0.53
RPAIN-208ENST00000571043 KLHL7Q8IXQ5 586 aa18.38■□□□□ 0.53
RPAIN-208ENST00000571043 HPDLQ96IR7 371 aa18.38■□□□□ 0.53
RPAIN-208ENST00000571043 PARVAQ9NVD7 372 aa18.38■□□□□ 0.53
RPAIN-208ENST00000571043 DPP3Q9NY33 737 aa18.38■□□□□ 0.53
RPAIN-208ENST00000571043 CEP83Q9Y592 693 aa18.38■□□□□ 0.53
RPAIN-208ENST00000571043 SART1O43290 800 aaKnown RBP18.37■□□□□ 0.53
RPAIN-208ENST00000571043 GLI1P08151 1106 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 MYBL2P10244 700 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 RAG1P15918 1043 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 RFC2P35250 354 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 YARSP54577 528 aaKnown RBP18.37■□□□□ 0.53
RPAIN-208ENST00000571043 RWDD2BP57060 319 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 MAMLD1Q13495 774 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 ZNF394Q53GI3 561 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 MFSD5Q6N075 450 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 EMBQ6PCB8 327 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 MMS22LQ6ZRQ5 1243 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 MAATS1Q7Z4T9 603 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 CCDC26Q8TAB7 109 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.37■□□□□ 0.532e-7■■■■■ 32.7
RPAIN-208ENST00000571043 KIF12Q96FN5 646 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 SNX27Q96L92 541 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 TSPAN18Q96SJ8 248 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 LHX5Q9H2C1 402 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 ACBD3Q9H3P7 528 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 AGAP1Q9UPQ3 857 aa18.37■□□□□ 0.53
RPAIN-208ENST00000571043 PIN4Q9Y237 131 aaKnown RBP18.37■□□□□ 0.53
RPAIN-208ENST00000571043 TRIP11Q15643 1979 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 BHMG1C9JSJ3 638 aaPredicted RBP18.36■□□□□ 0.53
RPAIN-208ENST00000571043 CILPO75339 1184 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 PROSCO94903 275 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 ITGA4P13612 1032 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 MAN1A1P33908 653 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 MARCKSL1P49006 195 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 EPHB4P54760 987 aa18.36■□□□□ 0.53
RPAIN-208ENST00000571043 MRPS25P82663 173 aaKnown RBP18.36■□□□□ 0.53
RPAIN-208ENST00000571043 GUCY2DQ02846 1103 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms