RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 IQCEQ6IPM2 695 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 VITQ6UXI7 678 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 WDR49Q8IV35 697 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 ELMOD1Q8N336 334 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 PJA1Q8NG27 643 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 SPATA18Q8TC71 538 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 SPPL2BQ8TCT7 592 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 C2orf15Q8WU43 125 aaKnown RBP8.42□□□□□ -1.06
CDH3-209ENST00000569080 TMEM174Q8WUU8 243 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 KBTBD7Q8WVZ9 684 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 SMARCD2Q92925 531 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 PAGE5Q96GU1 130 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 ZNF512Q96ME7 567 aaPredicted RBP8.42□□□□□ -1.06
CDH3-209ENST00000569080 CGRRF1Q99675 332 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 LPIN3Q9BQK8 851 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 FOXQ1Q9C009 403 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 GOLPH3LQ9H4A5 285 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 SLC39A2Q9NP94 309 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 NME7Q9Y5B8 376 aa8.42□□□□□ -1.06
CDH3-209ENST00000569080 ZFHX2Q9C0A1 2572 aaPredicted RBP8.42□□□□□ -1.06
CDH3-209ENST00000569080 F5P12259 2224 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.41□□□□□ -1.06
CDH3-209ENST00000569080 A0A1W2PQ27 194 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 A0A1W2PQ64 194 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 A0A1W2PQD8 194 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 PROB1E7EW31 1015 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 H0Y858 1186 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 CLIC2O15247 247 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 LRRN2O75325 713 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 TADA3O75528 432 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 PRR29P0C7W0 189 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 HAPLN1P10915 354 aaPredicted RBP8.41□□□□□ -1.06
CDH3-209ENST00000569080 HMGA1P17096 107 aaKnown RBP8.41□□□□□ -1.06
CDH3-209ENST00000569080 ACAT1P24752 427 aaKnown RBP8.41□□□□□ -1.06
CDH3-209ENST00000569080 VIPR2P41587 438 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 ALDH1A3P47895 512 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 GPR15P49685 360 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 NDUFA8P51970 172 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 EPHB3P54753 998 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 RBP5P82980 135 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 PRKCQQ04759 706 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 SMARCB1Q12824 385 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 BFSP1Q12934 665 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 SNW1Q13573 536 aaKnown RBP8.41□□□□□ -1.06
CDH3-209ENST00000569080 GRM2Q14416 872 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 MLF2Q15773 248 aaPredicted RBP8.41□□□□□ -1.06
CDH3-209ENST00000569080 KNOP1Q1ED39 458 aaKnown RBP8.41□□□□□ -1.06
CDH3-209ENST00000569080 SOWAHAQ2M3V2 549 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 KMT5BQ4FZB7 885 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 TRAPPC11Q7Z392 1133 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 DNAJB7Q7Z6W7 309 aaPredicted RBP8.41□□□□□ -1.06
CDH3-209ENST00000569080 TMEM150AQ86TG1 271 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 ALYREFQ86V81 257 aaKnown RBP8.41□□□□□ -1.06
CDH3-209ENST00000569080 ADGRF2Q8IZF7 708 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 ZNF687Q8N1G0 1237 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 TMEM86AQ8N2M4 240 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 CSGALNACT2Q8N6G5 542 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 TOP6BLQ8N6T0 577 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 DTWD2Q8NBA8 298 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 XXYLT1Q8NBI6 393 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 ZSCAN18Q8TBC5 510 aaPredicted RBP8.41□□□□□ -1.06
CDH3-209ENST00000569080 NOC3LQ8WTT2 800 aaKnown RBP8.41□□□□□ -1.06
CDH3-209ENST00000569080 CACTINQ8WUQ7 758 aaKnown RBP8.41□□□□□ -1.06
CDH3-209ENST00000569080 ZNF516Q92618 1163 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 DNASE1L2Q92874 299 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 SPATA32Q96LK8 384 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 LRRC3BQ96PB8 259 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 SEPT5Q99719 369 aaPredicted RBP8.41□□□□□ -1.06
CDH3-209ENST00000569080 ACBD6Q9BR61 282 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 KCTD10Q9H3F6 313 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 KIAA1586Q9HCI6 787 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 DMAC2Q9NW81 257 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 ABI2Q9NYB9 513 aaPredicted RBP8.41□□□□□ -1.06
CDH3-209ENST00000569080 ASB3Q9Y575 518 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 SNX9Q9Y5X1 595 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 ZNF292O60281 2723 aa8.41□□□□□ -1.06
CDH3-209ENST00000569080 PRAMEF12O95522 483 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 MYL1P05976 194 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 DCNP07585 359 aaKnown RBP8.4□□□□□ -1.06
CDH3-209ENST00000569080 KRT19P08727 400 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 DLATP10515 647 aaKnown RBP8.4□□□□□ -1.06
CDH3-209ENST00000569080 GABRR2P28476 465 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 NBL1P41271 181 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 SYKP43405 635 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 TUFMP49411 452 aaKnown RBP8.4□□□□□ -1.06
CDH3-209ENST00000569080 CASP4P49662 377 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 CYP2J2P51589 502 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 CLDN10P78369 228 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 PFKPQ01813 784 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 FCHO2Q0JRZ9 810 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 DPYDQ12882 1025 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 FZD5Q13467 585 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 ANGPT1Q15389 498 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 SURF1Q15526 300 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 NFE2Q16621 373 aaPredicted RBP8.4□□□□□ -1.06
CDH3-209ENST00000569080 DUOXA2Q1HG44 320 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 MGAT5BQ3V5L5 792 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 CFAP221Q4G0U5 840 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 HS2ST1Q7LGA3 356 aa8.4□□□□□ -1.06
CDH3-209ENST00000569080 METTL23Q86XA0 190 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms