RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 CPB1P15086 417 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 CLCN4P51793 760 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 NDST1P52848 882 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 UBASH3AP57075 661 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 YWHAEP62258 255 aaKnown RBP17.88■□□□□ 0.45
COMMD4-224ENST00000568877 TSPY1Q01534 308 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 ROR1Q01973 937 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 APBA1Q02410 837 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 SYCP1Q15431 976 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 DPY19L2P1Q6NXN4 242 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 GJB7Q6PEY0 223 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 ENOSF1Q7L5Y1 443 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 UNC93AQ86WB7 457 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 SLC22A17Q8WUG5 538 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 KAT5Q92993 513 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 ERGIC2Q96RQ1 377 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 LSM14BQ9BX40 385 aaKnown RBP17.88■□□□□ 0.45
COMMD4-224ENST00000568877 UBE2TQ9NPD8 197 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-224ENST00000568877 CISHQ9NSE2 258 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 CDH9Q9ULB4 789 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 BARX2Q9UMQ3 279 aaPredicted RBP17.88■□□□□ 0.45
COMMD4-224ENST00000568877 SIK3Q9Y2K2 1263 aa17.88■□□□□ 0.45
COMMD4-224ENST00000568877 FSD2A1L4K1 749 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 WDR27A2RRH5 827 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 TGM5O43548 720 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 ABLIM3O94929 683 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 GLUD1P00367 558 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 GTF2F1P35269 517 aaKnown RBP eCLIP17.87■□□□□ 0.454e-9■■■■■ 28.7
COMMD4-224ENST00000568877 KLK7P49862 253 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 GPR17Q13304 367 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 INTS6LQ5JSJ4 861 aaKnown RBP17.87■□□□□ 0.45
COMMD4-224ENST00000568877 KLHDC7AQ5VTJ3 777 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 TPGS2Q68CL5 300 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 LILRA6Q6PI73 481 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 DCP1BQ8IZD4 617 aaKnown RBP17.87■□□□□ 0.45
COMMD4-224ENST00000568877 ZNF461Q8TAF7 563 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 JAKMIP2Q96AA8 810 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 PCMTD1Q96MG8 357 aaPredicted RBP17.87■□□□□ 0.45
COMMD4-224ENST00000568877 KREMEN1Q96MU8 473 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 SYT15Q9BQS2 421 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 PLCB1Q9NQ66 1216 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 IFNKQ9P0W0 207 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 ATG2AQ2TAZ0 1938 aa17.87■□□□□ 0.45
COMMD4-224ENST00000568877 NCK2O43639 380 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 ATP2C2O75185 946 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 CILPO75339 1184 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 ACO1P21399 889 aaKnown RBP17.86■□□□□ 0.45
COMMD4-224ENST00000568877 MFAP3P55082 362 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 PSMC1P62191 440 aaKnown RBP17.86■□□□□ 0.45
COMMD4-224ENST00000568877 CCDC85BQ15834 202 aaPredicted RBP17.86■□□□□ 0.45
COMMD4-224ENST00000568877 SLC39A12Q504Y0 691 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 RNF19BQ6ZMZ0 732 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 LRRTM3Q86VH5 581 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 EFHBQ8N7U6 833 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 UBR7Q8N806 425 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 WHAMMQ8TF30 809 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 TNIP3Q96KP6 325 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 PKMYT1Q99640 499 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 NT5C1AQ9BXI3 368 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 DPEP3Q9H4B8 488 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 HMGXB4Q9UGU5 601 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 AFF4Q9UHB7 1163 aaKnown RBP17.86■□□□□ 0.45
COMMD4-224ENST00000568877 GTF3C4Q9UKN8 822 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 HCFC2Q9Y5Z7 792 aa17.86■□□□□ 0.45
COMMD4-224ENST00000568877 MYBPHLA2RUH7 354 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 ATF2P15336 505 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 EPCAMP16422 314 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 PTPN1P18031 435 aaKnown RBP17.85■□□□□ 0.45
COMMD4-224ENST00000568877 SMARCB1Q12824 385 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 ADAM15Q13444 863 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 KCNC3Q14003 757 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 IQCEQ6IPM2 695 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 LLGL2Q6P1M3 1020 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 FAM171BQ6P995 826 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 ACOT1Q86TX2 421 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 CRYBG2Q8N1P7 616 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 B3GALNT2Q8NCR0 500 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 PGLYRP2Q96PD5 576 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 TWNKQ96RR1 684 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 DNAI2Q9GZS0 605 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 CRTAC1Q9NQ79 661 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 FAM207AQ9NSI2 230 aaPredicted RBP17.85■□□□□ 0.45
COMMD4-224ENST00000568877 TMLHEQ9NVH6 421 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 DNAJC12Q9UKB3 198 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 PCDHB4Q9Y5E5 795 aa17.85■□□□□ 0.45
COMMD4-224ENST00000568877 A0A1W2PQC6 194 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 MTMR11A4FU01 709 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 LINC01565O15544 149 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 NOL4O94818 638 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 SPATA31D3P0C874 917 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 UCHL3P15374 230 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 RFX1P22670 979 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 RBM10P98175 930 aaKnown RBP17.84■□□□□ 0.45
COMMD4-224ENST00000568877 ADCY1Q08828 1119 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 ORC1Q13415 861 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 MAPRE1Q15691 268 aaKnown RBP17.84■□□□□ 0.45
COMMD4-224ENST00000568877 NFE2Q16621 373 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-224ENST00000568877 PTPN21Q16825 1174 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 ARHGAP44Q17R89 818 aa17.84■□□□□ 0.45
COMMD4-224ENST00000568877 ZNF394Q53GI3 561 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms