RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 WRAP73Q9P2S5 460 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-250ENST00000568290 LIMD1Q9UGP4 676 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 KIAA1257Q9ULG3 409 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 NEU2Q9Y3R4 380 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 PCDHB3Q9Y5E6 796 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 SIPA1L1O43166 1804 aa8.06□□□□□ -1.12
ATXN3-250ENST00000568290 MYH11P35749 1972 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 SPATA31C2B4DYI2 1134 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 VWA5AO00534 786 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 NFIBO00712 420 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 LIN7AO14910 233 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 ZBTB39O15060 712 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 ALOX15BO15296 676 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 C4BPAP04003 597 aaKnown RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 KRT1P04264 644 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 ADRB2P07550 413 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 RALAP11233 206 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 NDUFV2P19404 249 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 RRM1P23921 792 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 ADSSP30520 456 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 SLCO1A2P46721 670 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 YARSP54577 528 aaKnown RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 VCPP55072 806 aaKnown RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 GEMIN4P57678 1058 aaKnown RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 NOMO3P69849 1222 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 IFI35P80217 286 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 SARNPP82979 210 aaKnown RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 PRKCEQ02156 737 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 TNFAIP2Q03169 654 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 BNIP1Q12981 228 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 KLF1Q13351 362 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 MAMLD1Q13495 774 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 NCOA4Q13772 614 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 EMC2Q15006 297 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 SKIV2LQ15477 1246 aaKnown RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 DBN1Q16643 649 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 MAPK6Q16659 721 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 KYNUQ16719 465 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 LONRF1Q17RB8 773 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 TSNAXIP1Q2TAA8 658 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 ZNF568Q3ZCX4 644 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 SWSAP1Q6NVH7 229 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 TMEM270Q6UE05 265 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 PNMA8AQ86V59 439 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 APOBEC3FQ8IUX4 373 aaKnown RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 ALLCQ8N6M5 410 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 MDM1Q8TC05 714 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 PYROXD1Q8WU10 500 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 ZKSCAN4Q969J2 545 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 ZBTB9Q96C00 473 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 SAAL1Q96ER3 474 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 LRRC37BQ96QE4 947 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 SIKE1Q9BRV8 207 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 MAK16Q9BXY0 300 aaKnown RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 NIFKQ9BYG3 293 aaKnown RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 NIF3L1Q9GZT8 377 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 IQCGQ9H095 443 aaKnown RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 LHX5Q9H2C1 402 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 EPB41L4BQ9H329 900 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 RPAP3Q9H6T3 665 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-250ENST00000568290 ECT2Q9H8V3 914 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 MYOZ2Q9NPC6 264 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 PDLIM7Q9NR12 457 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 ASNSD1Q9NWL6 643 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 NINJ2Q9NZG7 142 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 PKD2L1Q9P0L9 805 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 NAALADL1Q9UQQ1 740 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 SLC27A5Q9Y2P5 690 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 NR2E1Q9Y466 385 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 CNTNAP1P78357 1384 aa8.05□□□□□ -1.12
ATXN3-250ENST00000568290 TMEM191CA6NGB0 347 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 LRRIQ4A6NIV6 560 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 ANKRD63C9JTQ0 380 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 DNM1LO00429 736 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 ABLIM1O14639 778 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 PPP1R12AO14974 1030 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-250ENST00000568290 MCF2LO15068 1137 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 OGTO15294 1046 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 LIASO43766 372 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 GRIN3BO60391 1043 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 TOM1L1O75674 476 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 RAD17O75943 681 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 UNC5CO95185 931 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 OAS1P00973 400 aaKnown RBP8.04□□□□□ -1.12
ATXN3-250ENST00000568290 TMEM191BP0C7N4 346 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 ZFXP17010 805 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-250ENST00000568290 MMP8P22894 467 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 ATICP31939 592 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 ELF1P32519 619 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 CDH5P33151 784 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-250ENST00000568290 MSH2P43246 934 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 KCNJ1P48048 391 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 IFNAR2P48551 515 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 SH3BGRP55822 239 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-250ENST00000568290 BACE1P56817 501 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 ACTR2P61160 394 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 NOP14P78316 857 aaKnown RBP8.04□□□□□ -1.12
ATXN3-250ENST00000568290 GUCA2AQ02747 115 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 SNX1Q13596 522 aa8.04□□□□□ -1.12
ATXN3-250ENST00000568290 BAATQ14032 418 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 484.5 ms