RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ZNF576Q9H609 170 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 AGPAT3Q9NRZ7 376 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 AGPAT5Q9NUQ2 364 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 TYW1Q9NV66 732 aaKnown RBP8.43□□□□□ -1.06
SMG1-214ENST00000568038 TRAF3IP3Q9Y228 551 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 TNFSF13BQ9Y275 285 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 OAS3Q9Y6K5 1087 aaKnown RBP8.43□□□□□ -1.06
SMG1-214ENST00000568038 CNTNAP2Q9UHC6 1331 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 SIP14410 1827 aa8.43□□□□□ -1.06
SMG1-214ENST00000568038 A0A1B0GUA9 196 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 GOLGA8IPA6NC78 632 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 GOLGA8JA6NMD2 632 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 CLDN3O15551 220 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 MGEA5O60502 916 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 TOM1L1O75674 476 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 NPTXRO95502 500 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 CXCL10P02778 98 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 NR3C1P04150 777 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 ACRP10323 421 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 ZSCAN20P17040 1043 aaPredicted RBP8.42□□□□□ -1.06
SMG1-214ENST00000568038 ERCC5P28715 1186 aaPredicted RBP8.42□□□□□ -1.06
SMG1-214ENST00000568038 ADSSP30520 456 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 ZNF165P49910 485 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 TPD52L1Q16890 204 aaPredicted RBP8.42□□□□□ -1.06
SMG1-214ENST00000568038 TCTN1Q2MV58 587 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 ZCWPW2Q504Y3 356 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 SEZ6Q53EL9 994 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 PLEKHG4Q58EX7 1191 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 SLFN12LQ6IEE8 588 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 MFSD5Q6N075 450 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 TTI2Q6NXR4 508 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 NOTUMQ6P988 496 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 MPZL3Q6UWV2 235 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 THNSL1Q8IYQ7 743 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 ZSWIM2Q8NEG5 633 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 SAAL1Q96ER3 474 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 EEF2KMTQ96G04 330 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 DUSP9Q99956 384 aaKnown RBP8.42□□□□□ -1.06
SMG1-214ENST00000568038 ADAM2Q99965 735 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 ADPGKQ9BRR6 497 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 YIPF2Q9BWQ6 316 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 EIF2AQ9BY44 585 aaKnown RBP8.42□□□□□ -1.06
SMG1-214ENST00000568038 HAPLN2Q9GZV7 340 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 NAT10Q9H0A0 1025 aaKnown RBP8.42□□□□□ -1.06
SMG1-214ENST00000568038 CDT1Q9H211 546 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 TMX1Q9H3N1 280 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 PTPRHQ9HD43 1115 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 RWDD2AQ9UIY3 292 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 AP4E1Q9UPM8 1137 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 ACTL7BQ9Y614 415 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 SCN5AQ14524 2016 aa8.42□□□□□ -1.06
SMG1-214ENST00000568038 A0A0B4J269 797 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 ABLIM1O14639 778 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 NFICP08651 508 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 SPINK2P20155 84 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 GARTP22102 1010 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 PROZP22891 400 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 NR2F2P24468 414 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 RFC2P35250 354 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 ADMP35318 185 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 IRAK1P51617 712 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 OSTNP61366 133 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 SNRPFP62306 86 aaKnown RBP8.41□□□□□ -1.06
SMG1-214ENST00000568038 FKBP3Q00688 224 aaKnown RBP8.41□□□□□ -1.06
SMG1-214ENST00000568038 LRRC63Q05C16 580 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 MCL1Q07820 350 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 ADAM9Q13443 819 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 DSC3Q14574 896 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 NOLC1Q14978 699 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMG1-214ENST00000568038 EDRF1Q3B7T1 1238 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 HSP90AA4PQ58FG1 418 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 CT47A1Q5JQC4 288 aaPredicted RBP8.41□□□□□ -1.06
SMG1-214ENST00000568038 ZBTB41Q5SVQ8 909 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 UBXN11Q5T124 520 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 SLC27A1Q6PCB7 646 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 APBB1IPQ7Z5R6 666 aaPredicted RBP8.41□□□□□ -1.06
SMG1-214ENST00000568038 RTN4RL1Q86UN2 441 aaPredicted RBP8.41□□□□□ -1.06
SMG1-214ENST00000568038 CREBRFQ8IUR6 639 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 RPUSD2Q8IZ73 545 aaKnown RBP8.41□□□□□ -1.06
SMG1-214ENST00000568038 CSGALNACT2Q8N6G5 542 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 AOPEPQ8N6M6 819 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 RNF214Q8ND24 703 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 GOLGA5Q8TBA6 731 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 ENOX1Q8TC92 643 aaKnown RBP8.41□□□□□ -1.06
SMG1-214ENST00000568038 EPS8L3Q8TE67 593 aaKnown RBP8.41□□□□□ -1.06
SMG1-214ENST00000568038 VWCEQ96DN2 955 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 LBHD1Q9BQE6 289 aaPredicted RBP8.41□□□□□ -1.06
SMG1-214ENST00000568038 FAM213AQ9BRX8 229 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 TRIM56Q9BRZ2 755 aaKnown RBP8.41□□□□□ -1.06
SMG1-214ENST00000568038 MSTO1Q9BUK6 570 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 APOL6Q9BWW8 343 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 SRRTQ9BXP5 876 aaKnown RBP8.41□□□□□ -1.06
SMG1-214ENST00000568038 TRIM6Q9C030 488 aaPredicted RBP8.41□□□□□ -1.06
SMG1-214ENST00000568038 ZFYVE1Q9HBF4 777 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 CBX8Q9HC52 389 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 CHST12Q9NRB3 414 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 HSPBP1Q9NZL4 362 aa8.41□□□□□ -1.06
SMG1-214ENST00000568038 CGNQ9P2M7 1197 aaKnown RBP8.41□□□□□ -1.06
SMG1-214ENST00000568038 AGO2Q9UKV8 859 aaKnown RBP8.41□□□□□ -1.06
SMG1-214ENST00000568038 HES2Q9Y543 173 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms