RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 NOP56O00567 594 aaKnown RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 STRNO43815 780 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 EXOC3O60645 756 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 CILPO75339 1184 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 NDUFA10O95299 355 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 LGALS2P05162 132 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 TPM1P09493 284 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 RPL13P26373 211 aaKnown RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 HNRNPH3P31942 346 aaKnown RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 GRK4P32298 578 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 FMO5P49326 533 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 RTP1P59025 263 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 POLR2FP61218 127 aaKnown RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 RPL6Q02878 288 aaKnown RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 BFSP1Q12934 665 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 CRHR2Q13324 411 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 ACVR2BQ13705 512 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 ALCAMQ13740 583 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 PWP2Q15269 919 aaKnown RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 PTPN14Q15678 1187 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 ZBTB41Q5SVQ8 909 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 FAM160B1Q5W0V3 765 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 SCARA3Q6AZY7 606 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 IQCEQ6IPM2 695 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 KCNV1Q6PIU1 500 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 CYP26C1Q6V0L0 522 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 SYT10Q6XYQ8 523 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 STXBP4Q6ZWJ1 553 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 RRAGAQ7L523 313 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 DPP9Q86TI2 863 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 TMTC1Q8IUR5 882 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 NEK11Q8NG66 645 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 LMO3Q8TAP4 145 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 ATP8B4Q8TF62 1192 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 EZH1Q92800 747 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 GLG1Q92896 1179 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 HVCN1Q96D96 273 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 ZBTB45Q96K62 511 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 MPHOSPH6Q99547 160 aaKnown RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 TINF2Q9BSI4 451 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 C16orf70Q9BSU1 422 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 NAA15Q9BXJ9 866 aaKnown RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 ARHGAP39Q9C0H5 1083 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 GPR88Q9GZN0 384 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 CCDC113Q9H0I3 377 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 TMEM206Q9H813 350 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 METTL14Q9HCE5 456 aaKnown RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 TOPORSQ9NS56 1045 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 CEP72Q9P209 647 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 ZHX1Q9UKY1 873 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 EPN1Q9Y6I3 576 aaPredicted RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 DNAH12Q6ZR08 3092 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 ZNF638Q14966 1978 aaKnown RBP6.22□□□□□ -1.41
SF3B3-210ENST00000567654 PTPRJQ12913 1337 aa6.22□□□□□ -1.41
SF3B3-210ENST00000567654 LRRIQ4A6NIV6 560 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 LRRIQ3A6PVS8 624 aaPredicted RBP6.21□□□□□ -1.42
SF3B3-210ENST00000567654 C22orf31O95567 290 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 BPNT1O95861 308 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 GH1P01241 217 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 MMP3P08254 477 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 CCDC175P0C221 793 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 ZNF865P0CJ78 1059 aaPredicted RBP6.21□□□□□ -1.42
SF3B3-210ENST00000567654 CYP2B6P20813 491 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 YY1P25490 414 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 CNGA1P29973 690 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 MAPK4P31152 587 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 CYP2C19P33261 490 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 NAMPTP43490 491 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 GCLMP48507 274 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 CLCN3P51790 818 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 VAMP7P51809 220 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 JAM2P57087 298 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 NLRP11P59045 1033 aaKnown RBP6.21□□□□□ -1.42
SF3B3-210ENST00000567654 ETF1P62495 437 aaKnown RBP6.21□□□□□ -1.42
SF3B3-210ENST00000567654 IGBP1P78318 339 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 MYL7Q01449 175 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 GRM1Q13255 1194 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 MYBPC2Q14324 1141 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 NKG7Q16617 165 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 ASTE1Q2TB18 679 aaPredicted RBP6.21□□□□□ -1.42
SF3B3-210ENST00000567654 SEZ6Q53EL9 994 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 KLHDC7AQ5VTJ3 777 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 OLFML2BQ68BL8 750 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 CYP4F22Q6NT55 531 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 PAOXQ6QHF9 649 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 CRELD2Q6UXH1 353 aaPredicted RBP6.21□□□□□ -1.42
SF3B3-210ENST00000567654 PLPPR4Q7Z2D5 763 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 DNAAF5Q86Y56 855 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 ARHGEF19Q8IW93 802 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.21□□□□□ -1.42
SF3B3-210ENST00000567654 LINC01465Q8N7H1 131 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 XXYLT1Q8NBI6 393 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 LRRN4CLQ8ND94 238 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 TRPV1Q8NER1 839 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 OR6J1Q8NGC5 347 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 GOLGA5Q8TBA6 731 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 TMEM174Q8WUU8 243 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 PRPF31Q8WWY3 499 aaKnown RBP6.21□□□□□ -1.42
SF3B3-210ENST00000567654 SEMA4DQ92854 862 aa6.21□□□□□ -1.42
SF3B3-210ENST00000567654 KCNN1Q92952 543 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms