RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 MAMSTRQ6ZN01 415 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 ARID3BQ8IVW6 561 aaPredicted RBP15.34■□□□□ 0.05
COMMD4-216ENST00000567023 DCP1BQ8IZD4 617 aaKnown RBP15.34■□□□□ 0.05
COMMD4-216ENST00000567023 TMEM86AQ8N2M4 240 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 PDCL2Q8N4E4 241 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 CSGALNACT2Q8N6G5 542 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 GLIS3Q8NEA6 775 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 KCNG4Q8TDN1 519 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 ACBD6Q9BR61 282 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 PCIF1Q9H4Z3 704 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 SLITRK6Q9H5Y7 841 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 MAGEF1Q9HAY2 307 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 KIAA1586Q9HCI6 787 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 PDE11AQ9HCR9 933 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 OBP2AQ9NY56 170 aa15.34■□□□□ 0.05
COMMD4-216ENST00000567023 TCHHQ07283 1943 aa15.33■□□□□ 0.05
COMMD4-216ENST00000567023 FANCMQ8IYD8 2048 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 ZNF233A6NK53 670 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 CHADO15335 359 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 LMNAP02545 664 aaKnown RBP15.33■□□□□ 0.04
COMMD4-216ENST00000567023 HAPLN1P10915 354 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-216ENST00000567023 RBP5P82980 135 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 EHHADHQ08426 723 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 VEPH1Q14D04 833 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 SURF1Q15526 300 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 NFE2Q16621 373 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-216ENST00000567023 STXBP5Q5T5C0 1151 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 SCARA3Q6AZY7 606 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 C1orf228Q6PIY5 440 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 DPH6Q7L8W6 267 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 HSCBQ8IWL3 235 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 ADSSL1Q8N142 457 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 LEO1Q8WVC0 666 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-216ENST00000567023 HPS3Q969F9 1004 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 DHX58Q96C10 678 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 RSPRY1Q96DX4 576 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 MSANTD3Q96H12 275 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 SEPT5Q99719 369 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-216ENST00000567023 LPIN3Q9BQK8 851 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 ATXN3LQ9H3M9 355 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 IL21Q9HBE4 155 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 INTS13Q9NVM9 706 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 SPATA6Q9NWH7 488 aaPredicted RBP15.33■□□□□ 0.04
COMMD4-216ENST00000567023 SIX4Q9UIU6 781 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 ZMYM5Q9UJ78 669 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 L1RE1Q9UN81 338 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 PCDHB5Q9Y5E4 795 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 COL4A2P08572 1712 aa15.33■□□□□ 0.04
COMMD4-216ENST00000567023 GABRDO14764 452 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 POLR2DO15514 142 aaKnown RBP15.32■□□□□ 0.04
COMMD4-216ENST00000567023 TGFB1I1O43294 461 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 LAMTOR5O43504 91 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 HUS1O60921 280 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 F13A1P00488 732 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 CDC25CP30307 473 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 SNRPFP62306 86 aaKnown RBP15.32■□□□□ 0.04
COMMD4-216ENST00000567023 TSPY1Q01534 308 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 ARHGAP15Q53QZ3 475 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 LIMS2Q7Z4I7 341 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 TOP6BLQ8N6T0 577 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 FAM200AQ8TCP9 573 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 FAM3CQ92520 227 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 NELL1Q92832 810 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 LRRC3BQ96PB8 259 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 PKMYT1Q99640 499 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 IER2Q9BTL4 223 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 MTMR12Q9C0I1 747 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 TASP1Q9H6P5 420 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 ABCB6Q9NP58 842 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 TMLHEQ9NVH6 421 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 ABI2Q9NYB9 513 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-216ENST00000567023 HSPBP1Q9NZL4 362 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 CFAP45Q9UL16 551 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 PCDHA7Q9UN72 937 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 PIAS3Q9Y6X2 628 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 R4GN57 208 aa15.32■□□□□ 0.04
COMMD4-216ENST00000567023 ZNF292O60281 2723 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 PATJQ8NI35 1801 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 DMXL1Q9Y485 3027 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 SOBPA7XYQ1 873 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 HSP90AA1P07900 732 aaKnown RBP15.31■□□□□ 0.04
COMMD4-216ENST00000567023 TMEM191BP0C7N4 346 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 HMGA1P17096 107 aaKnown RBP15.31■□□□□ 0.04
COMMD4-216ENST00000567023 LHX1P48742 406 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 ASIC1P78348 528 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 DUOXA2Q1HG44 320 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 FAM26FQ5R3K3 315 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 GPR158Q5T848 1215 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 UNC13DQ70J99 1090 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 CBWD2Q8IUF1 395 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 YAF2Q8IY57 180 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 ANKRD36BP1Q96IX9 119 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 DDX43Q9NXZ2 648 aaKnown RBP15.31■□□□□ 0.04
COMMD4-216ENST00000567023 RCOR1Q9UKL0 485 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 SNX9Q9Y5X1 595 aa15.31■□□□□ 0.04
COMMD4-216ENST00000567023 PVALEFA0A1B0GWK0 134 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 UBE4BO95155 1302 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 F11P03951 625 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 KRT19P08727 400 aa15.3■□□□□ 0.04
COMMD4-216ENST00000567023 DDX6P26196 483 aaKnown RBP eCLIP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms