RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 SLURP1P55000 103 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 ARL4CP56559 192 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 WNT3P56703 355 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 LINC00310P59036 64 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 MFSD5Q6N075 450 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 BORAQ6PGQ7 559 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 SPOCD1Q6ZMY3 1216 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 MED25Q71SY5 747 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 PPP1R32Q7Z5V6 425 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 CLASRPQ8N2M8 674 aaKnown RBP5.93□□□□□ -1.46
CNOT1-209ENST00000566240 PDPRQ8NCN5 879 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 FAM71BQ8TC56 605 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 ZNF384Q8TF68 577 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 TBATAQ96M53 351 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 CNPPD1Q9BV87 410 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 RRN3Q9NYV6 651 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 POGKQ9P215 609 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 CLCA2Q9UQC9 943 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 TBC1D30Q9Y2I9 924 aa5.93□□□□□ -1.46
CNOT1-209ENST00000566240 LOC102723971A0A1B0GUV8 181 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 DRGXA6NNA5 263 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 TRIM38O00635 465 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 PIP5K1BO14986 540 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 KCNQ3O43525 872 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 PRSS23O95084 383 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 ITGB1P05556 798 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 CYP2C9P11712 490 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 GNAT2P19087 354 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 ACVR2AP27037 513 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 VIPR2P41587 438 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 FSTL1Q12841 308 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 JMJD6Q6NYC1 403 aaPredicted RBP5.92□□□□□ -1.46
CNOT1-209ENST00000566240 DRICH1Q6PGQ1 229 aaPredicted RBP5.92□□□□□ -1.46
CNOT1-209ENST00000566240 CYP26C1Q6V0L0 522 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 USP49Q70CQ1 688 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 TMEM151BQ8IW70 566 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 GALNT15Q8N3T1 639 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 STYXQ8WUJ0 223 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 TMEM176AQ96HP8 235 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 MOGAT1Q96PD6 335 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 LMF1Q96S06 567 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 PPP1R9BQ96SB3 815 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 CPEB1Q9BZB8 566 aaKnown RBP5.92□□□□□ -1.46
CNOT1-209ENST00000566240 SEC61A2Q9H9S3 476 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 AS3MTQ9HBK9 375 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 TMEM8AQ9HCN3 771 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 HEYLQ9NQ87 328 aaPredicted RBP5.92□□□□□ -1.46
CNOT1-209ENST00000566240 XPNPEP3Q9NQH7 507 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 MRPS18AQ9NVS2 196 aaKnown RBP5.92□□□□□ -1.46
CNOT1-209ENST00000566240 ZSCAN32Q9NX65 697 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 HECAQ9UBI9 543 aaPredicted RBP5.92□□□□□ -1.46
CNOT1-209ENST00000566240 HESX1Q9UBX0 185 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 CAPN11Q9UMQ6 739 aa5.92□□□□□ -1.46
CNOT1-209ENST00000566240 LRRFIP2Q9Y608 721 aaKnown RBP5.92□□□□□ -1.46
CNOT1-209ENST00000566240 DBX1A6NMT0 343 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 NOBOXO60393 691 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 VPS4BO75351 444 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 AGR2O95994 175 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 CKBP12277 381 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 MGAT1P26572 445 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 CPT1AP50416 773 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 PPP2CBP62714 309 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 PPP2CAP67775 309 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 ARHGEF7Q14155 803 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 GRM7Q14831 915 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 TAF5Q15542 800 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 NPY5RQ15761 445 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 KCNA10Q16322 511 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 PLA1AQ53H76 456 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 ARHGAP15Q53QZ3 475 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 NOMO2Q5JPE7 1267 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 ARL6IP4Q66PJ3 421 aaKnown RBP5.91□□□□□ -1.46
CNOT1-209ENST00000566240 PLAG1Q6DJT9 500 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 USP17L6PQ6QN14 398 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 ARHGEF18Q6ZSZ5 1173 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 KIAA0408Q6ZU52 694 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 RFX8Q6ZV50 586 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 PLEKHH3Q7Z736 793 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 GAS2L3Q86XJ1 694 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 SUGP1Q8IWZ8 645 aaKnown RBP5.91□□□□□ -1.46
CNOT1-209ENST00000566240 ZFPM1Q8IX07 1006 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 NUP133Q8WUM0 1156 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 ST8SIA2Q92186 375 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 PHACTR3Q96KR7 559 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 UBXN10Q96LJ8 280 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 LRRC37BQ96QE4 947 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 MESP1Q9BRJ9 268 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 PLA2G12BQ9BX93 195 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 TLR10Q9BXR5 811 aa5.91□□□□□ -1.46
CNOT1-209ENST00000566240 DHX36Q9H2U1 1008 aaKnown RBP5.91□□□□□ -1.46
CNOT1-209ENST00000566240 H7C4K7 107 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 IPO5O00410 1097 aaKnown RBP5.9□□□□□ -1.46
CNOT1-209ENST00000566240 POLRMTO00411 1230 aaKnown RBP5.9□□□□□ -1.46
CNOT1-209ENST00000566240 IRAK2O43187 625 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 CCP110O43303 1012 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 MFAP3LO75121 409 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 TNFRSF6BO95407 300 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 ITGA5P08648 1049 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 INHBBP09529 407 aa5.9□□□□□ -1.46
CNOT1-209ENST00000566240 SRGNP10124 158 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms