RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 HSD17B14Q9BPX1 270 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 EIF2AK1Q9BQI3 630 aaKnown RBP18.17■□□□□ 0.5
CLK3-217ENST00000566126 C2orf40Q9H1Z8 148 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 ECT2Q9H8V3 914 aa18.17■□□□□ 0.5
CLK3-217ENST00000566126 PTPRQQ9UMZ3 2332 aa18.16■□□□□ 0.5
CLK3-217ENST00000566126 MTMR11A4FU01 709 aa18.16■□□□□ 0.5
CLK3-217ENST00000566126 ARHGAP33O14559 1287 aa18.16■□□□□ 0.5
CLK3-217ENST00000566126 MARCH6O60337 910 aa18.16■□□□□ 0.5
CLK3-217ENST00000566126 MAP7D1Q3KQU3 841 aa18.16■□□□□ 0.5
CLK3-217ENST00000566126 C2orf27AQ580R0 203 aa18.16■□□□□ 0.5
CLK3-217ENST00000566126 TMEM92Q6UXU6 159 aa18.16■□□□□ 0.5
CLK3-217ENST00000566126 TTC30AQ86WT1 665 aa18.16■□□□□ 0.5
CLK3-217ENST00000566126 LSM14AQ8ND56 463 aaKnown RBP18.16■□□□□ 0.5
CLK3-217ENST00000566126 PIGOQ8TEQ8 1089 aa18.16■□□□□ 0.5
CLK3-217ENST00000566126 EXOC4Q96A65 974 aa18.16■□□□□ 0.5
CLK3-217ENST00000566126 LPIN3Q9BQK8 851 aa18.16■□□□□ 0.5
CLK3-217ENST00000566126 CIZ1Q9ULV3 898 aaPredicted RBP18.16■□□□□ 0.5
CLK3-217ENST00000566126 MMP17Q9ULZ9 603 aa18.16■□□□□ 0.5
CLK3-217ENST00000566126 APOBEC2Q9Y235 224 aaKnown RBP18.16■□□□□ 0.5
CLK3-217ENST00000566126 TIMM13Q9Y5L4 95 aaPredicted RBP18.16■□□□□ 0.5
CLK3-217ENST00000566126 PIEZO2Q9H5I5 2752 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 K7EQS6 105 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 ARHGAP6O43182 974 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 KCNE1P15382 129 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 CDC25CP30307 473 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 SEC13P55735 322 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 YWHAHQ04917 246 aaPredicted RBP18.15■□□□□ 0.5
CLK3-217ENST00000566126 SLC14A1Q13336 389 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 NBR1Q14596 966 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 PDGFRLQ15198 375 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 ATF7IP2Q5U623 682 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 ITIH5Q86UX2 942 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 NAXDQ8IW45 347 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 CCDC33Q8N5R6 958 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 SPACA7Q96KW9 195 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 CCDC43Q96MW1 224 aaKnown RBP18.15■□□□□ 0.5
CLK3-217ENST00000566126 PRORYQ9H606 182 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 MGAQ8IWI9 3026 aa18.15■□□□□ 0.5
CLK3-217ENST00000566126 TRABD2BA6NFA1 517 aa18.14■□□□□ 0.49
CLK3-217ENST00000566126 M0QZQ0 153 aa18.14■□□□□ 0.49
CLK3-217ENST00000566126 CBFA2T3O75081 653 aa18.14■□□□□ 0.49
CLK3-217ENST00000566126 IFNAR1P17181 557 aa18.14■□□□□ 0.49
CLK3-217ENST00000566126 MARCKSP29966 332 aaPredicted RBP18.14■□□□□ 0.49
CLK3-217ENST00000566126 GRM5P41594 1212 aa18.14■□□□□ 0.49
CLK3-217ENST00000566126 YARSP54577 528 aaKnown RBP18.14■□□□□ 0.49
CLK3-217ENST00000566126 OSTNP61366 133 aa18.14■□□□□ 0.49
CLK3-217ENST00000566126 GLRX5Q86SX6 157 aa18.14■□□□□ 0.49
CLK3-217ENST00000566126 TMEM150AQ86TG1 271 aa18.14■□□□□ 0.49
CLK3-217ENST00000566126 POTEDQ86YR6 584 aa18.14■□□□□ 0.49
CLK3-217ENST00000566126 TMEM130Q8N3G9 435 aa18.14■□□□□ 0.49
CLK3-217ENST00000566126 CPA6Q8N4T0 437 aa18.14■□□□□ 0.49
CLK3-217ENST00000566126 TOPORSQ9NS56 1045 aaPredicted RBP18.14■□□□□ 0.49
CLK3-217ENST00000566126 TDP1Q9NUW8 608 aa18.14■□□□□ 0.49
CLK3-217ENST00000566126 KIAA1522Q9P206 1035 aaPredicted RBP18.14■□□□□ 0.49
CLK3-217ENST00000566126 MUC22E2RYF6 1773 aaPredicted RBP18.14■□□□□ 0.49
CLK3-217ENST00000566126 LARGE1O95461 756 aa18.13■□□□□ 0.49
CLK3-217ENST00000566126 ITPKBP27987 946 aa18.13■□□□□ 0.49
CLK3-217ENST00000566126 AVPR1AP37288 418 aa18.13■□□□□ 0.49
CLK3-217ENST00000566126 BFSP1Q12934 665 aa18.13■□□□□ 0.49
CLK3-217ENST00000566126 CAMK2BQ13554 666 aa18.13■□□□□ 0.49
CLK3-217ENST00000566126 LMBRD2Q68DH5 695 aaPredicted RBP18.13■□□□□ 0.49
CLK3-217ENST00000566126 CC2D1AQ6P1N0 951 aaPredicted RBP18.13■□□□□ 0.49
CLK3-217ENST00000566126 RASEFQ8IZ41 740 aa18.13■□□□□ 0.49
CLK3-217ENST00000566126 MAB21L3Q8N8X9 362 aa18.13■□□□□ 0.49
CLK3-217ENST00000566126 WHAMMQ8TF30 809 aa18.13■□□□□ 0.49
CLK3-217ENST00000566126 DCBLD2Q96PD2 775 aa18.13■□□□□ 0.49
CLK3-217ENST00000566126 GCNAQ96QF7 691 aa18.13■□□□□ 0.49
CLK3-217ENST00000566126 KIFC3Q9BVG8 833 aa18.13■□□□□ 0.49
CLK3-217ENST00000566126 OXCT2Q9BYC2 517 aaPredicted RBP18.13■□□□□ 0.49
CLK3-217ENST00000566126 KIF9Q9HAQ2 790 aa18.13■□□□□ 0.49
CLK3-217ENST00000566126 DACH1Q9UI36 760 aa18.13■□□□□ 0.49
CLK3-217ENST00000566126 OR6C75A6NL08 312 aa18.12■□□□□ 0.49
CLK3-217ENST00000566126 CCNT1O60563 726 aaKnown RBP18.12■□□□□ 0.49
CLK3-217ENST00000566126 ALDH1A2O94788 518 aa18.12■□□□□ 0.49
CLK3-217ENST00000566126 GCFC2P16383 781 aaKnown RBP18.12■□□□□ 0.49
CLK3-217ENST00000566126 ATF6P18850 670 aa18.12■□□□□ 0.49
CLK3-217ENST00000566126 KRT25Q7Z3Z0 450 aa18.12■□□□□ 0.49
CLK3-217ENST00000566126 NEK8Q86SG6 692 aa18.12■□□□□ 0.49
CLK3-217ENST00000566126 DEFB119Q8N690 84 aa18.12■□□□□ 0.49
CLK3-217ENST00000566126 MCPH1Q8NEM0 835 aa18.12■□□□□ 0.49
CLK3-217ENST00000566126 CCDC26Q8TAB7 109 aa18.12■□□□□ 0.49
CLK3-217ENST00000566126 ESYT1Q9BSJ8 1104 aa18.12■□□□□ 0.49
CLK3-217ENST00000566126 CCDC94Q9BW85 323 aaPredicted RBP18.12■□□□□ 0.49
CLK3-217ENST00000566126 CDT1Q9H211 546 aa18.12■□□□□ 0.49
CLK3-217ENST00000566126 ANO2Q9NQ90 1003 aa18.12■□□□□ 0.49
CLK3-217ENST00000566126 CNTN3Q9P232 1028 aa18.12■□□□□ 0.49
CLK3-217ENST00000566126 DAXXQ9UER7 740 aaPredicted RBP18.12■□□□□ 0.49
CLK3-217ENST00000566126 ZMYM5Q9UJ78 669 aa18.12■□□□□ 0.49
CLK3-217ENST00000566126 PTPN13Q12923 2485 aa18.12■□□□□ 0.49
CLK3-217ENST00000566126 COL6A6A6NMZ7 2263 aa18.11■□□□□ 0.49
CLK3-217ENST00000566126 CHRM1P11229 460 aaPredicted RBP18.11■□□□□ 0.49
CLK3-217ENST00000566126 CPA1P15085 419 aa18.11■□□□□ 0.49
CLK3-217ENST00000566126 NMT1P30419 496 aaKnown RBP18.11■□□□□ 0.49
CLK3-217ENST00000566126 NAMPTP43490 491 aa18.11■□□□□ 0.49
CLK3-217ENST00000566126 AAMPQ13685 434 aa18.11■□□□□ 0.49
CLK3-217ENST00000566126 RNF20Q5VTR2 975 aa18.11■□□□□ 0.49
CLK3-217ENST00000566126 PCSK4Q6UW60 755 aa18.11■□□□□ 0.49
CLK3-217ENST00000566126 DEPTORQ8TB45 409 aa18.11■□□□□ 0.49
CLK3-217ENST00000566126 OSCP1Q8WVF1 389 aa18.11■□□□□ 0.49
CLK3-217ENST00000566126 BRF1Q92994 677 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms