RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 NSUN4Q96CB9 384 aaKnown RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 FAM84BQ96KN1 310 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 PPM1MQ96MI6 270 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 SAMD11Q96NU1 681 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 PSKH2Q96QS6 385 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 ZPBPQ9BS86 351 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 MYL10Q9BUA6 226 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 CCSER1Q9C0I3 900 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 ANKRD2Q9GZV1 360 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 ABCB6Q9NP58 842 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 SAMSN1Q9NSI8 373 aaKnown RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 DDX18Q9NVP1 670 aaKnown RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 TMEM260Q9NX78 707 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 OBP2AQ9NY56 170 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 SIRPGQ9P1W8 387 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 NFKBIL1Q9UBC1 381 aaPredicted RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 AGTPBP1Q9UPW5 1226 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 ZNF510Q9Y2H8 683 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 TMED5Q9Y3A6 229 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.5□□□□□ -1.53
CAPN3-214ENST00000565274 ROBO3Q96MS0 1386 aa5.5□□□□□ -1.53
CAPN3-214ENST00000565274 SPATA31A1Q5TZJ5 1347 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ATXN2Q99700 1313 aaKnown RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 CNTNAP4Q9C0A0 1308 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 IRS2Q9Y4H2 1338 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 GPR75-ASB3A0A0A6YYF3 556 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 LOC100289279A0A1B0GTE1 492 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 A0A1B0GVC2 190 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 TARSL2A2RTX5 802 aaKnown RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 A8MVJ9 347 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 EIF3CLB5ME19 914 aaKnown RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ALG1L2C9J202 215 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 UBE2Q2LH0YL09 131 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 SLC7A4O43246 635 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 MGEA5O60502 916 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ICMTO60725 284 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 SHOX2O60902 331 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 PRPF6O94906 941 aaKnown RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 PDGFAP04085 211 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 RPLP1P05386 114 aaKnown RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 VIMP08670 466 aaKnown RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ALAS1P13196 640 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ATP2B4P23634 1241 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 EEF1GP26641 437 aaKnown RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ADMP35318 185 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ARHGAP25P42331 645 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 RANBP1P43487 201 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 HAAOP46952 286 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ETV1P50549 477 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 INHBCP55103 352 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ARHGAP4P98171 946 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 MPP1Q00013 466 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 GSTM4Q03013 218 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 CKAP4Q07065 602 aaKnown RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 KLHL30Q0D2K2 578 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 FAPQ12884 760 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 LAMB3Q13751 1172 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 CCNG2Q16589 344 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 PTPN21Q16825 1174 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 TRIM71Q2Q1W2 868 aaKnown RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 SUPT20HL1Q3ZLR7 823 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 FIGNQ5HY92 759 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ZNF569Q5MCW4 686 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 LCE1DQ5T752 114 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 TPGS2Q68CL5 300 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 THOC7Q6I9Y2 204 aaKnown RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 RCSD1Q6JBY9 416 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 LIN54Q6MZP7 749 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 CNNM4Q6P4Q7 775 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 CNSTQ6PJW8 725 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 LRRC31Q6UY01 552 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 NCCRP1Q6ZVX7 275 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 USP49Q70CQ1 688 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 NANOGNBQ7Z5D8 188 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 VN1R5Q7Z5H4 357 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ADGRA1Q86SQ6 560 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 SLC9B2Q86UD5 537 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 GALNT13Q8IUC8 556 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 COLGALT2Q8IYK4 626 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ADSSL1Q8N142 457 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 SRBD1Q8N5C6 995 aaKnown RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 IGSF22Q8N9C0 903 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 TMEM102Q8N9M5 508 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ZBTB8BQ8NAP8 495 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 SMG8Q8ND04 991 aaKnown RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 OR6C4Q8NGE1 309 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 TRPC4APQ8TEL6 797 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 RUBCNQ92622 972 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ARL8AQ96BM9 186 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 AK8Q96MA6 479 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 EIF3CQ99613 913 aaKnown RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 DNAJC7Q99615 494 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 ZKSCAN3Q9BRR0 538 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 TMPRSS13Q9BYE2 586 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 CRNKL1Q9BZJ0 848 aaKnown RBP5.49□□□□□ -1.53
CAPN3-214ENST00000565274 FOXP3Q9BZS1 431 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 CHRDQ9H2X0 955 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 NCOR1P1Q9H4R4 102 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 THAP9Q9H5L6 903 aa5.49□□□□□ -1.53
CAPN3-214ENST00000565274 BRD9Q9H8M2 597 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms