RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 MGAT5BQ3V5L5 792 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 PABPC1LQ4VXU2 614 aaKnown RBP10.66□□□□□ -0.7
CDH1-206ENST00000564676 TDRD10Q5VZ19 366 aaKnown RBP10.66□□□□□ -0.7
CDH1-206ENST00000564676 ANKRD40Q6AI12 368 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 CENPPQ6IPU0 288 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 KLHL10Q6JEL2 608 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 LRRTM3Q86VH5 581 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 OSTM1Q86WC4 334 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 ZDHHC14Q8IZN3 488 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 ADSSL1Q8N142 457 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 SPATA18Q8TC71 538 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 EEF2KMTQ96G04 330 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 DHTKD1Q96HY7 919 aaPredicted RBP10.66□□□□□ -0.7
CDH1-206ENST00000564676 ACBD6Q9BR61 282 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 CORO1BQ9BR76 489 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 HCFC1R1Q9NWW0 138 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.66□□□□□ -0.7
CDH1-206ENST00000564676 NXF1Q9UBU9 619 aaKnown RBP10.66□□□□□ -0.7
CDH1-206ENST00000564676 MRPS23Q9Y3D9 190 aaKnown RBP10.66□□□□□ -0.7
CDH1-206ENST00000564676 YIPF1Q9Y548 306 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 C5orf42Q9H799 3197 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 TRIM49BA6NDI0 452 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 VNN2O95498 520 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 STAU1O95793 577 aaKnown RBP10.65□□□□□ -0.7
CDH1-206ENST00000564676 ASGR2P07307 311 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 RHOP08100 348 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 PDGFRBP09619 1106 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 TRIM49P0CI25 452 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 TRIM49CP0CI26 452 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 GNL1P36915 607 aaPredicted RBP10.65□□□□□ -0.7
CDH1-206ENST00000564676 TUFMP49411 452 aaKnown RBP10.65□□□□□ -0.7
CDH1-206ENST00000564676 PMS1P54277 932 aaKnown RBP10.65□□□□□ -0.7
CDH1-206ENST00000564676 LRRC63Q05C16 580 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 MORC3Q14149 939 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 NFE2Q16621 373 aaPredicted RBP10.65□□□□□ -0.7
CDH1-206ENST00000564676 ZNF699Q32M78 642 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 ZACNQ401N2 412 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 ZNF667Q5HYK9 610 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 LCE2DQ5TA82 110 aaPredicted RBP10.65□□□□□ -0.7
CDH1-206ENST00000564676 CYP4A22Q5TCH4 519 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 CLEC17AQ6ZS10 378 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 SV2AQ7L0J3 742 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 OR6B3Q8NGW1 331 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 FAM200AQ8TCP9 573 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 C2orf15Q8WU43 125 aaKnown RBP10.65□□□□□ -0.7
CDH1-206ENST00000564676 SPOCK2Q92563 424 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 MYADMQ96S97 322 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 SEPT5Q99719 369 aaPredicted RBP10.65□□□□□ -0.7
CDH1-206ENST00000564676 MKNK1Q9BUB5 465 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 C1QTNF1Q9BXJ1 281 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 SNX25Q9H3E2 840 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 MMRN2Q9H8L6 949 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 ABI2Q9NYB9 513 aaPredicted RBP10.65□□□□□ -0.7
CDH1-206ENST00000564676 KIAA1468Q9P260 1216 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 PCDHB5Q9Y5E4 795 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 DOCK8Q8NF50 2099 aa10.65□□□□□ -0.7
CDH1-206ENST00000564676 DENND4AQ7Z401 1863 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 TSC2P49815 1807 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 PPP1R3GB7ZBB8 358 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 GOLGA6L22H0YM25 854 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 ZNF197O14709 1029 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 GABRDO14764 452 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 HCRTO43612 131 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 N4BP1O75113 896 aaKnown RBP10.64□□□□□ -0.71
CDH1-206ENST00000564676 SOAT2O75908 522 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 FAM163BP0C2L3 166 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 MYL4P12829 197 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 LAMP2P13473 410 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 WARSP23381 471 aaKnown RBP10.64□□□□□ -0.71
CDH1-206ENST00000564676 PIK3CAP42336 1068 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 GCLMP48507 274 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 ENPEPQ07075 957 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 PTPN21Q16825 1174 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 SGSM1Q2NKQ1 1148 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 INTS6LQ5JSJ4 861 aaKnown RBP10.64□□□□□ -0.71
CDH1-206ENST00000564676 PDZD4Q76G19 769 aaPredicted RBP10.64□□□□□ -0.71
CDH1-206ENST00000564676 HS6ST3Q8IZP7 471 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 TTC9BQ8N6N2 239 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 TRIML1Q8N9V2 468 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 ITFG1Q8TB96 612 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 SPPL2BQ8TCT7 592 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 NELFBQ8WX92 580 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 FGF13Q92913 245 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 SYT15Q9BQS2 421 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 MRPL45Q9BRJ2 306 aaKnown RBP10.64□□□□□ -0.71
CDH1-206ENST00000564676 XYLT2Q9H1B5 865 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 CRISPLD1Q9H336 500 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 ASAH2Q9NR71 780 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 LMBRD1Q9NUN5 540 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 TMLHEQ9NVH6 421 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 CEP72Q9P209 647 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 EPS15L1Q9UBC2 864 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 HSFX1Q9UBD0 423 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 GTF3C4Q9UKN8 822 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 CDH9Q9ULB4 789 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 CDH7Q9ULB5 785 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 CTNND2Q9UQB3 1225 aa10.64□□□□□ -0.71
CDH1-206ENST00000564676 ZFP37Q9Y6Q3 630 aaPredicted RBP10.64□□□□□ -0.71
CDH1-206ENST00000564676 NOTCH4Q99466 2003 aa10.63□□□□□ -0.71
CDH1-206ENST00000564676 BICDL2A1A5D9 508 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms