RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 OSTM1Q86WC4 334 aa27.18■■□□□ 1.94
AC009041.3-201ENST00000564390 ADGRF2Q8IZF7 708 aa27.18■■□□□ 1.94
AC009041.3-201ENST00000564390 FAM200AQ8TCP9 573 aa27.18■■□□□ 1.94
AC009041.3-201ENST00000564390 ASB16Q96NS5 453 aa27.18■■□□□ 1.94
AC009041.3-201ENST00000564390 CGRRF1Q99675 332 aa27.18■■□□□ 1.94
AC009041.3-201ENST00000564390 SCAND2PQ9GZW5 306 aaPredicted RBP27.18■■□□□ 1.94
AC009041.3-201ENST00000564390 GDAP2Q9NXN4 497 aa27.18■■□□□ 1.94
AC009041.3-201ENST00000564390 DDX43Q9NXZ2 648 aaKnown RBP27.18■■□□□ 1.94
AC009041.3-201ENST00000564390 R3HCC1Q9Y3T6 440 aaKnown RBP27.18■■□□□ 1.94
AC009041.3-201ENST00000564390 SNRPFP62306 86 aaKnown RBP27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 TSPY1Q01534 308 aa27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 SNW1Q13573 536 aaKnown RBP27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 PSMD6Q15008 389 aa27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 STXBP5Q5T5C0 1151 aa27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 DNAJB7Q7Z6W7 309 aaPredicted RBP27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 ALYREFQ86V81 257 aaKnown RBP27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 DCP1BQ8IZD4 617 aaKnown RBP27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 ZSCAN18Q8TBC5 510 aaPredicted RBP27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 GIPC2Q8TF65 315 aa27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 PSMG2Q969U7 264 aa27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 ELSPBP1Q96BH3 223 aa27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 HPDLQ96IR7 371 aa27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 FNBP1Q96RU3 617 aa27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 FOXQ1Q9C009 403 aa27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 HSFX1Q9UBD0 423 aa27.17■■□□□ 1.94
AC009041.3-201ENST00000564390 NCANO14594 1321 aa27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 FAM237AA0A1B0GTK4 181 aa27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 TNNI1P19237 187 aa27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 TUFMP49411 452 aaKnown RBP27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 NUBP1P53384 320 aa27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 MYO1EQ12965 1108 aa27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 SOWAHAQ2M3V2 549 aa27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 TRAPPC11Q7Z392 1133 aa27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 C12orf56Q8IXR9 622 aa27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 TMEM86AQ8N2M4 240 aa27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 STKLD1Q8NE28 680 aa27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 SPPL2BQ8TCT7 592 aa27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 SMARCD2Q92925 531 aa27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 GZF1Q9H116 711 aaPredicted RBP27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 ZFP14Q9HCL3 533 aa27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 ASB3Q9Y575 518 aa27.16■■□□□ 1.94
AC009041.3-201ENST00000564390 EXOC3O60645 756 aa27.15■■□□□ 1.94
AC009041.3-201ENST00000564390 RPN1P04843 607 aaKnown RBP27.15■■□□□ 1.94
AC009041.3-201ENST00000564390 HAPLN1P10915 354 aaPredicted RBP27.15■■□□□ 1.94
AC009041.3-201ENST00000564390 VIPR2P41587 438 aa27.15■■□□□ 1.94
AC009041.3-201ENST00000564390 MYL7Q01449 175 aa27.15■■□□□ 1.94
AC009041.3-201ENST00000564390 VEPH1Q14D04 833 aa27.15■■□□□ 1.94
AC009041.3-201ENST00000564390 MLF2Q15773 248 aaPredicted RBP27.15■■□□□ 1.94
AC009041.3-201ENST00000564390 INTS6LQ5JSJ4 861 aaKnown RBP27.15■■□□□ 1.94
AC009041.3-201ENST00000564390 GAREM2Q75VX8 874 aa27.15■■□□□ 1.94
AC009041.3-201ENST00000564390 ITIH5Q86UX2 942 aa27.15■■□□□ 1.94
AC009041.3-201ENST00000564390 TOP6BLQ8N6T0 577 aa27.15■■□□□ 1.94
AC009041.3-201ENST00000564390 C2orf15Q8WU43 125 aaKnown RBP27.15■■□□□ 1.94
AC009041.3-201ENST00000564390 PI4K2AQ9BTU6 479 aa27.15■■□□□ 1.94
AC009041.3-201ENST00000564390 PCDHB5Q9Y5E4 795 aa27.15■■□□□ 1.94
AC009041.3-201ENST00000564390 A0A1W2PQ27 194 aa27.14■■□□□ 1.94
AC009041.3-201ENST00000564390 A0A1W2PQ64 194 aa27.14■■□□□ 1.94
AC009041.3-201ENST00000564390 A0A1W2PQD8 194 aa27.14■■□□□ 1.94
AC009041.3-201ENST00000564390 DCNP07585 359 aaKnown RBP27.14■■□□□ 1.94
AC009041.3-201ENST00000564390 GABRR2P28476 465 aa27.14■■□□□ 1.94
AC009041.3-201ENST00000564390 CASP4P49662 377 aa27.14■■□□□ 1.94
AC009041.3-201ENST00000564390 GPR15P49685 360 aa27.14■■□□□ 1.94
AC009041.3-201ENST00000564390 SMARCB1Q12824 385 aa27.14■■□□□ 1.94
AC009041.3-201ENST00000564390 VITQ6UXI7 678 aa27.14■■□□□ 1.94
AC009041.3-201ENST00000564390 GPIHBP1Q8IV16 184 aa27.14■■□□□ 1.94
AC009041.3-201ENST00000564390 CCDC105Q8IYK2 499 aa27.14■■□□□ 1.94
AC009041.3-201ENST00000564390 ACBD6Q9BR61 282 aa27.14■■□□□ 1.94
AC009041.3-201ENST00000564390 CGNQ9P2M7 1197 aaKnown RBP27.14■■□□□ 1.94
AC009041.3-201ENST00000564390 MRE11P49959 708 aa27.13■■□□□ 1.93
AC009041.3-201ENST00000564390 PFKPQ01813 784 aa27.13■■□□□ 1.93
AC009041.3-201ENST00000564390 PSMD2Q13200 908 aa27.13■■□□□ 1.93
AC009041.3-201ENST00000564390 SLC44A4Q53GD3 710 aa27.13■■□□□ 1.93
AC009041.3-201ENST00000564390 PHLDB3Q6NSJ2 640 aa27.13■■□□□ 1.93
AC009041.3-201ENST00000564390 DTWD2Q8NBA8 298 aa27.13■■□□□ 1.93
AC009041.3-201ENST00000564390 PLEKHO2Q8TD55 490 aa27.13■■□□□ 1.93
AC009041.3-201ENST00000564390 KBTBD7Q8WVZ9 684 aa27.13■■□□□ 1.93
AC009041.3-201ENST00000564390 ATOH1Q92858 354 aaPredicted RBP27.13■■□□□ 1.93
AC009041.3-201ENST00000564390 PKMYT1Q99640 499 aa27.13■■□□□ 1.93
AC009041.3-201ENST00000564390 KCTD10Q9H3F6 313 aa27.13■■□□□ 1.93
AC009041.3-201ENST00000564390 ATXN3LQ9H3M9 355 aa27.13■■□□□ 1.93
AC009041.3-201ENST00000564390 GTF3C4Q9UKN8 822 aa27.13■■□□□ 1.93
AC009041.3-201ENST00000564390 LRRN2O75325 713 aa27.12■■□□□ 1.93
AC009041.3-201ENST00000564390 PRPF40AO75400 957 aaKnown RBP27.12■■□□□ 1.93
AC009041.3-201ENST00000564390 MYL1P05976 194 aa27.12■■□□□ 1.93
AC009041.3-201ENST00000564390 CYP4F8P98187 520 aa27.12■■□□□ 1.93
AC009041.3-201ENST00000564390 SDHAF4Q5VUM1 108 aa27.12■■□□□ 1.93
AC009041.3-201ENST00000564390 KRBA2Q6ZNG9 492 aa27.12■■□□□ 1.93
AC009041.3-201ENST00000564390 GOLGA5Q8TBA6 731 aa27.12■■□□□ 1.93
AC009041.3-201ENST00000564390 ZNF516Q92618 1163 aa27.12■■□□□ 1.93
AC009041.3-201ENST00000564390 RSPRY1Q96DX4 576 aa27.12■■□□□ 1.93
AC009041.3-201ENST00000564390 COL4A2P08572 1712 aa27.12■■□□□ 1.93
AC009041.3-201ENST00000564390 GABRDO14764 452 aa27.11■■□□□ 1.93
AC009041.3-201ENST00000564390 ATP2C2O75185 946 aa27.11■■□□□ 1.93
AC009041.3-201ENST00000564390 CST3P01034 146 aaPredicted RBP27.11■■□□□ 1.93
AC009041.3-201ENST00000564390 CD72P21854 359 aa27.11■■□□□ 1.93
AC009041.3-201ENST00000564390 LHX1P48742 406 aa27.11■■□□□ 1.93
AC009041.3-201ENST00000564390 STARD6P59095 220 aa27.11■■□□□ 1.93
AC009041.3-201ENST00000564390 PSMC1P62191 440 aaKnown RBP27.11■■□□□ 1.93
AC009041.3-201ENST00000564390 DPYDQ12882 1025 aa27.11■■□□□ 1.93
AC009041.3-201ENST00000564390 TAF12Q16514 161 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms