RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 M0QYG6 137 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 IPO5O00410 1097 aaKnown RBP3.04□□□□□ -1.92
CHD9-209ENST00000564255 TRIM38O00635 465 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 CKBP12277 381 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 IDEP14735 1019 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 NPPBP16860 134 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 EGR1P18146 543 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 BDNFP23560 247 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 POLE2P56282 527 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 RAP2BP61225 183 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 SLFN5Q08AF3 891 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 GRM1Q13255 1194 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 ARHGEF7Q14155 803 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 SLC29A2Q14542 456 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 MAPKAPK3Q16644 382 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 TRIM71Q2Q1W2 868 aaKnown RBP3.04□□□□□ -1.92
CHD9-209ENST00000564255 FAM214AQ32MH5 1076 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.04□□□□□ -1.92
CHD9-209ENST00000564255 METTL24Q5JXM2 366 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 ATXN7L2Q5T6C5 722 aaPredicted RBP3.04□□□□□ -1.92
CHD9-209ENST00000564255 LIN54Q6MZP7 749 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 DRICH1Q6PGQ1 229 aaPredicted RBP3.04□□□□□ -1.92
CHD9-209ENST00000564255 FAM111BQ6SJ93 734 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 MOGAT3Q86VF5 341 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 KBTBD2Q8IY47 623 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 PCSK9Q8NBP7 692 aaKnown RBP3.04□□□□□ -1.92
CHD9-209ENST00000564255 NAXEQ8NCW5 288 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 CCDC150Q8NCX0 1101 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 FAM46DQ8NEK8 389 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 SHCBP1Q8NEM2 672 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 OTUD7AQ8TE49 926 aaPredicted RBP3.04□□□□□ -1.92
CHD9-209ENST00000564255 ZNF512Q96ME7 567 aaPredicted RBP3.04□□□□□ -1.92
CHD9-209ENST00000564255 CNPPD1Q9BV87 410 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 CPEB1Q9BZB8 566 aaKnown RBP3.04□□□□□ -1.92
CHD9-209ENST00000564255 SEC61A2Q9H9S3 476 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 MAP3K20Q9NYL2 800 aaKnown RBP3.04□□□□□ -1.92
CHD9-209ENST00000564255 SRP68Q9UHB9 627 aaKnown RBP3.04□□□□□ -1.92
CHD9-209ENST00000564255 DTNAQ9Y4J8 743 aa3.04□□□□□ -1.92
CHD9-209ENST00000564255 DCLK1O15075 740 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 SLC6A2P23975 617 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 FBXO47Q5MNV8 452 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 METRNLQ641Q3 311 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 FCRL6Q6DN72 434 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 XYLT1Q86Y38 959 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 ZFPM1Q8IX07 1006 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 MPP5Q8N3R9 675 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 SLC17A8Q8NDX2 589 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 SIMC1Q8NDZ2 872 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 PPHLN1Q8NEY8 458 aaKnown RBP3.03□□□□□ -1.92
CHD9-209ENST00000564255 ZFP28Q8NHY6 868 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 NUP133Q8WUM0 1156 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 LRRC46Q96FV0 321 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 MOGAT1Q96PD6 335 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 DDX23Q9BUQ8 820 aaKnown RBP3.03□□□□□ -1.92
CHD9-209ENST00000564255 CD320Q9NPF0 282 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 MRPS18AQ9NVS2 196 aaKnown RBP3.03□□□□□ -1.92
CHD9-209ENST00000564255 SWAP70Q9UH65 585 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 HERC5Q9UII4 1024 aaKnown RBP3.03□□□□□ -1.92
CHD9-209ENST00000564255 ZMYND8Q9ULU4 1186 aaPredicted RBP3.03□□□□□ -1.92
CHD9-209ENST00000564255 CA14Q9ULX7 337 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 CDHR4A6H8M9 788 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 RRN3P2A6NIE6 340 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 RFXAPO00287 272 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 EIF3FO00303 357 aaPredicted RBP3.03□□□□□ -1.92
CHD9-209ENST00000564255 PIP5K1BO14986 540 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 KIF20AO95235 890 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 TNFRSF6BO95407 300 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 PYGLP06737 847 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 GCSHP23434 173 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 CPT1AP50416 773 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 TOB1P50616 345 aaPredicted RBP3.03□□□□□ -1.92
CHD9-209ENST00000564255 BOP1Q14137 746 aaKnown RBP3.03□□□□□ -1.92
CHD9-209ENST00000564255 TAF5Q15542 800 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 SLC5A9Q2M3M2 681 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 ZNF385BQ569K4 471 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 TMTC4Q5T4D3 741 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 HERC6Q8IVU3 1022 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 COLGALT2Q8IYK4 626 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 OR52N2Q8NGI0 321 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 SLC30A5Q8TAD4 765 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 POC1BQ8TC44 478 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 NEIL1Q96FI4 390 aaPredicted RBP3.03□□□□□ -1.92
CHD9-209ENST00000564255 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 HEYLQ9NQ87 328 aaPredicted RBP3.03□□□□□ -1.92
CHD9-209ENST00000564255 HECAQ9UBI9 543 aaPredicted RBP3.03□□□□□ -1.92
CHD9-209ENST00000564255 CRYL1Q9Y2S2 319 aa3.03□□□□□ -1.92
CHD9-209ENST00000564255 MYO1CO00159 1063 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 EPB41L2O43491 1005 aaKnown RBP3.02□□□□□ -1.93
CHD9-209ENST00000564255 B4GALT3O60512 393 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 TRIM13O60858 407 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 RASSF9O75901 435 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 PRSS23O95084 383 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 GLP2RO95838 553 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 FAM163BP0C2L3 166 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 CST5P28325 142 aaPredicted RBP3.02□□□□□ -1.93
CHD9-209ENST00000564255 PNLIPRP1P54315 467 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 LMOD3Q0VAK6 560 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 INSCQ1MX18 579 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 FAM110CQ1W6H9 321 aa3.02□□□□□ -1.93
CHD9-209ENST00000564255 SLC4A8Q2Y0W8 1093 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms