RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 GZMAP12544 262 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 UNGP13051 313 aaPredicted RBP10.82□□□□□ -0.68
SMG1-208ENST00000563448 CD19P15391 556 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 PAX3P23760 479 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 SLC11A1P49279 550 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 CLEC16AQ2KHT3 1053 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 FAM117BQ6P1L5 589 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 ACOT1Q86TX2 421 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 TMEM86AQ8N2M4 240 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 LRRC43Q8N309 656 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 CYFIP2Q96F07 1278 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 SUSD3Q96L08 255 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 HEXIM2Q96MH2 286 aaKnown RBP10.82□□□□□ -0.68
SMG1-208ENST00000563448 LPIN3Q9BQK8 851 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 ISCUQ9H1K1 167 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 SNX25Q9H3E2 840 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 CWH43Q9H720 699 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 LZTFL1Q9NQ48 299 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 PCDHGC3Q9UN70 934 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 PRG3Q9Y2Y8 225 aaPredicted RBP10.82□□□□□ -0.68
SMG1-208ENST00000563448 TIMM13Q9Y5L4 95 aaPredicted RBP10.82□□□□□ -0.68
SMG1-208ENST00000563448 PATJQ8NI35 1801 aa10.82□□□□□ -0.68
SMG1-208ENST00000563448 GOLGA6L9A6NEM1 432 aa10.81□□□□□ -0.68
SMG1-208ENST00000563448 RTN2O75298 545 aa10.81□□□□□ -0.68
SMG1-208ENST00000563448 PDGFRBP09619 1106 aa10.81□□□□□ -0.68
SMG1-208ENST00000563448 GALCP54803 685 aa10.81□□□□□ -0.68
SMG1-208ENST00000563448 TMEM240Q5SV17 173 aa10.81□□□□□ -0.68
SMG1-208ENST00000563448 ACAD10Q6JQN1 1059 aa10.81□□□□□ -0.68
SMG1-208ENST00000563448 NYAP1Q6ZVC0 841 aa10.81□□□□□ -0.68
SMG1-208ENST00000563448 PASD1Q8IV76 773 aa10.81□□□□□ -0.68
SMG1-208ENST00000563448 CRYBG2Q8N1P7 616 aa10.81□□□□□ -0.68
SMG1-208ENST00000563448 C12orf29Q8N999 325 aa10.81□□□□□ -0.68
SMG1-208ENST00000563448 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.81□□□□□ -0.681e-7■■■■□ 19.8
SMG1-208ENST00000563448 TMEM175Q9BSA9 504 aa10.81□□□□□ -0.68
SMG1-208ENST00000563448 RRAGDQ9NQL2 400 aaPredicted RBP10.81□□□□□ -0.68
SMG1-208ENST00000563448 MARCH5Q9NX47 278 aa10.81□□□□□ -0.68
SMG1-208ENST00000563448 ZMYND8Q9ULU4 1186 aaPredicted RBP10.81□□□□□ -0.68
SMG1-208ENST00000563448 DUSP10Q9Y6W6 482 aa10.81□□□□□ -0.68
SMG1-208ENST00000563448 ATP8B3O60423 1300 aa10.81□□□□□ -0.68
SMG1-208ENST00000563448 MED7O43513 233 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 ALDH2P05091 517 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 CYP11A1P05108 521 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 GALTP07902 379 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 ODC1P11926 461 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 NOMO3P69849 1222 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 ARHGAP29Q52LW3 1261 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 SGO2Q562F6 1265 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 PPP1R26Q5T8A7 1209 aaPredicted RBP10.8□□□□□ -0.68
SMG1-208ENST00000563448 KIAA0319Q5VV43 1072 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 DENND1BQ6P3S1 775 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 TRIM72Q6ZMU5 477 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 WDTC1Q8N5D0 677 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 PDCL3Q9H2J4 239 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 LUC7LQ9NQ29 371 aaKnown RBP10.8□□□□□ -0.68
SMG1-208ENST00000563448 DDX43Q9NXZ2 648 aaKnown RBP10.8□□□□□ -0.68
SMG1-208ENST00000563448 KIAA1257Q9ULG3 409 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMG1-208ENST00000563448 FAN1Q9Y2M0 1017 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 CCDC85CA6NKD9 419 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 ZBBXA8MT70 800 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 NT5C1B-RDH14C9J2C7 533 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 O00370 1275 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 ATP2C2O75185 946 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 FTLP02792 175 aaPredicted RBP10.8□□□□□ -0.68
SMG1-208ENST00000563448 H2AFZP0C0S5 128 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 ACAT1P24752 427 aaKnown RBP10.8□□□□□ -0.68
SMG1-208ENST00000563448 CDH5P33151 784 aaPredicted RBP10.8□□□□□ -0.68
SMG1-208ENST00000563448 PBX3P40426 434 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 LHX1P48742 406 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 BCAR1P56945 870 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 CENPCQ03188 943 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 KIF5AQ12840 1032 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 CNGA2Q16280 664 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 NAA35Q5VZE5 725 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 PSRC1Q6PGN9 363 aaPredicted RBP10.8□□□□□ -0.68
SMG1-208ENST00000563448 H2AFVQ71UI9 128 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 CPA5Q8WXQ8 436 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 C16orf45Q96MC5 204 aaPredicted RBP10.8□□□□□ -0.68
SMG1-208ENST00000563448 RTP3Q9BQQ7 232 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 COLEC11Q9BWP8 271 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 IRX2Q9BZI1 471 aaPredicted RBP10.8□□□□□ -0.68
SMG1-208ENST00000563448 SALL4Q9UJQ4 1053 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 ADAM28Q9UKQ2 775 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 INTUQ9ULD6 942 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 GUCA1BQ9UMX6 200 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 PCDHB8Q9UN66 801 aa10.8□□□□□ -0.68
SMG1-208ENST00000563448 GREB1Q4ZG55 1949 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 ANKRD62A6NC57 917 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 KRT86O43790 486 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 TADA2AO75478 443 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 MICAL2O94851 1124 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 TYMPP19971 482 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 ABCB4P21439 1286 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 PSMC1P62191 440 aaKnown RBP10.79□□□□□ -0.68
SMG1-208ENST00000563448 PTPN14Q15678 1187 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 ARHGAP17Q68EM7 881 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 LCLAT1Q6UWP7 414 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 TMEM173Q86WV6 379 aaPredicted RBP10.79□□□□□ -0.68
SMG1-208ENST00000563448 TXLNBQ8N3L3 684 aa10.79□□□□□ -0.68
SMG1-208ENST00000563448 C1orf131Q8NDD1 294 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms