RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 GTF2H1P32780 548 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 CDH8P55286 799 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 NTHL1P78549 312 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 DUSP4Q13115 394 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 PAK1Q13153 545 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 TRPC3Q13507 836 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 DPCR1Q3MIW9 517 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 WDR72Q3MJ13 1102 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 CBWD6Q4V339 395 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 SLC39A12Q504Y0 691 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 CBWD3Q5JTY5 395 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 CBWD5Q5RIA9 395 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 PPM1LQ5SGD2 360 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 SPOPLQ6IQ16 392 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 FAM171BQ6P995 826 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 ELMSAN1Q6PJG2 1045 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 CCDC149Q6ZUS6 474 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 GRASPQ7Z6J2 395 aaPredicted RBP9.16□□□□□ -0.94
UBR1-204ENST00000563239 IRF2BP1Q8IU81 584 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 GJD3Q8N144 294 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 THEM5Q8N1Q8 247 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 MLKLQ8NB16 471 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 SPATA18Q8TC71 538 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 SPOCK2Q92563 424 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 SLC35C1Q96A29 364 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 SYAP1Q96A49 352 aaPredicted RBP9.16□□□□□ -0.94
UBR1-204ENST00000563239 RPGRIP1Q96KN7 1286 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 LPIN3Q9BQK8 851 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 ACBD6Q9BR61 282 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 PI4K2AQ9BTU6 479 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 DNAJC25Q9H1X3 360 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 SMYD3Q9H7B4 428 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 CYP4F11Q9HBI6 524 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 APOBEC3GQ9HC16 384 aaKnown RBP9.16□□□□□ -0.94
UBR1-204ENST00000563239 TMEM8AQ9HCN3 771 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 CRTAC1Q9NQ79 661 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 DDX43Q9NXZ2 648 aaKnown RBP9.16□□□□□ -0.94
UBR1-204ENST00000563239 CEP72Q9P209 647 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 DNMT3BQ9UBC3 853 aaKnown RBP9.16□□□□□ -0.94
UBR1-204ENST00000563239 RWDD2AQ9UIY3 292 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 SLC27A5Q9Y2P5 690 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 NCOR1O75376 2440 aa9.16□□□□□ -0.94
UBR1-204ENST00000563239 NOTCH4Q99466 2003 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 CLUHO75153 1309 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 BICDL2A1A5D9 508 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 MYBPHLA2RUH7 354 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 C2CD4DB7Z1M9 353 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 GOLGA6L22H0YM25 854 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 PRRG1O14668 218 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 SOAT2O75908 522 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 SP100P23497 879 aaPredicted RBP9.15□□□□□ -0.94
UBR1-204ENST00000563239 ASPAP45381 313 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 RAP1GAPP47736 663 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 LHX1P48742 406 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 MARSP56192 900 aaKnown RBP9.15□□□□□ -0.94
UBR1-204ENST00000563239 NLRP12P59046 1061 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 TWF1Q12792 350 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 SGSM1Q2NKQ1 1148 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 ZNF699Q32M78 642 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 INTS6LQ5JSJ4 861 aaKnown RBP9.15□□□□□ -0.94
UBR1-204ENST00000563239 KRT39Q6A163 491 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 FRMD5Q7Z6J6 570 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 MYADMQ96S97 322 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 MMS19Q96T76 1030 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 SRRTQ9BXP5 876 aaKnown RBP9.15□□□□□ -0.94
UBR1-204ENST00000563239 LRRC3Q9BY71 257 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 MMRN2Q9H8L6 949 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.15□□□□□ -0.941e-7■■■■■ 44.7
UBR1-204ENST00000563239 HSFX1Q9UBD0 423 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 NXF1Q9UBU9 619 aaKnown RBP9.15□□□□□ -0.94
UBR1-204ENST00000563239 ARMCX3Q9UH62 379 aaPredicted RBP9.15□□□□□ -0.94
UBR1-204ENST00000563239 GTF3C4Q9UKN8 822 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 COQ4Q9Y3A0 265 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 YIPF1Q9Y548 306 aa9.15□□□□□ -0.94
UBR1-204ENST00000563239 DOCK6Q96HP0 2047 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 TNFRSF10AO00220 468 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 MOSPD3O75425 235 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 MBD3O95983 291 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 PDGFRBP09619 1106 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 HAPLN1P10915 354 aaPredicted RBP9.14□□□□□ -0.95
UBR1-204ENST00000563239 ATF6P18850 670 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 ELF1P32519 619 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 GNL1P36915 607 aaPredicted RBP9.14□□□□□ -0.95
UBR1-204ENST00000563239 CCR2P41597 374 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 PIK3CAP42336 1068 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 PSMC1P62191 440 aaKnown RBP9.14□□□□□ -0.95
UBR1-204ENST00000563239 TNNC1P63316 161 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 MYL7Q01449 175 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 SLC5A9Q2M3M2 681 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 DCAF17Q5H9S7 520 aaPredicted RBP9.14□□□□□ -0.95
UBR1-204ENST00000563239 ZNF667Q5HYK9 610 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 PRSS36Q5K4E3 855 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 RNF135Q8IUD6 432 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 TRIM59Q8IWR1 403 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 DCP1BQ8IZD4 617 aaKnown RBP9.14□□□□□ -0.95
UBR1-204ENST00000563239 ZDHHC14Q8IZN3 488 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 HS6ST3Q8IZP7 471 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 ITFG1Q8TB96 612 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 TAF4BQ92750 862 aa9.14□□□□□ -0.95
UBR1-204ENST00000563239 SYT15Q9BQS2 421 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms