RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SLC27A1Q6PCB7 646 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 KATNAL2Q8IYT4 538 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 OR2W6PQ8NHA6 318 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 LRRC45Q96CN5 670 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 TMEM176AQ96HP8 235 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 FAXDC2Q96IV6 333 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 LHX5Q9H2C1 402 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 GOLGA6AQ9NYA3 693 aa20.25■□□□□ 0.83
SMPD3-203ENST00000563226 GOLGA8KD6RF30 607 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 GOLGA8SH3BPF8 625 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 PPEF2O14830 753 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 DARSP14868 501 aaKnown RBP20.24■□□□□ 0.83
SMPD3-203ENST00000563226 CTGFP29279 349 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 FNTAP49354 379 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 PLTPP55058 493 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 RBP5P82980 135 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 IRF5Q13568 498 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 DCUN1D2Q6PH85 259 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 GOLGA6L1Q8N7Z2 621 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 C3orf20Q8ND61 904 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 FBXO25Q8TCJ0 367 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 FMO2Q99518 471 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 CYP3A43Q9HB55 503 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 PSD3Q9NYI0 1048 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 DNAH12Q6ZR08 3092 aa20.24■□□□□ 0.83
SMPD3-203ENST00000563226 H0YGN5 161 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 MED7O43513 233 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 MICAL2O94851 1124 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 DHX9Q08211 1270 aaKnown RBP20.23■□□□□ 0.83
SMPD3-203ENST00000563226 KLF1Q13351 362 aaPredicted RBP20.23■□□□□ 0.83
SMPD3-203ENST00000563226 SNX27Q96L92 541 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 CPXM1Q96SM3 734 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 NXF3Q9H4D5 531 aaKnown RBP20.23■□□□□ 0.83
SMPD3-203ENST00000563226 TUBGCP4Q9UGJ1 667 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 NFS1Q9Y697 457 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 PDCD11Q14690 1871 aaKnown RBP20.23■□□□□ 0.83
SMPD3-203ENST00000563226 ERICH4A6NGS2 130 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 PI4K2BG5E9Z4 385 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 IGHA2P01877 340 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 RGS2P41220 211 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 NDST1P52848 882 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 DRG2P55039 364 aaKnown RBP20.23■□□□□ 0.83
SMPD3-203ENST00000563226 GLRA4Q5JXX5 417 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 TXNRD3NBQ6F5E7 133 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 CD302Q8IX05 232 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 UBLCP1Q8WVY7 318 aaPredicted RBP20.23■□□□□ 0.83
SMPD3-203ENST00000563226 RNF25Q96BH1 459 aaPredicted RBP20.23■□□□□ 0.83
SMPD3-203ENST00000563226 APBA2Q99767 749 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 FAM118BQ9BPY3 351 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 TXLNGYQ9BZA5 131 aa20.23■□□□□ 0.83
SMPD3-203ENST00000563226 PODXLO00592 558 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 ERBB2P04626 1255 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 SLC10A3P09131 477 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 P4HA1P13674 534 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 CYP3A5P20815 502 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 CPT1AP50416 773 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 NOTUMQ6P988 496 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 DPH6Q7L8W6 267 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 SH2D3CQ8N5H7 860 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 JOSD2Q8TAC2 188 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 C18orf25Q96B23 403 aaPredicted RBP20.22■□□□□ 0.83
SMPD3-203ENST00000563226 DCLK3Q9C098 648 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.22■□□□□ 0.83
SMPD3-203ENST00000563226 ECEL1O95672 775 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 STAU1O95793 577 aaKnown RBP20.22■□□□□ 0.83
SMPD3-203ENST00000563226 ADCY2Q08462 1091 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 INCA1Q0VD86 236 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 CRHR2Q13324 411 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 KCTD16Q68DU8 428 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 SMYD5Q6GMV2 418 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 NT5DC4Q86YG4 428 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 EXD1Q8NHP7 514 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 FAM76AQ8TAV0 307 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 ACSF2Q96CM8 615 aaPredicted RBP20.22■□□□□ 0.83
SMPD3-203ENST00000563226 APOL6Q9BWW8 343 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 OSBPL8Q9BZF1 889 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 AP5M1Q9H0R1 490 aa20.22■□□□□ 0.83
SMPD3-203ENST00000563226 BARX2Q9UMQ3 279 aaPredicted RBP20.22■□□□□ 0.83
SMPD3-203ENST00000563226 MYADML2A6NDP7 307 aa20.21■□□□□ 0.83
SMPD3-203ENST00000563226 M0QYV0 167 aa20.21■□□□□ 0.83
SMPD3-203ENST00000563226 TNPO2O14787 897 aaKnown RBP20.21■□□□□ 0.83
SMPD3-203ENST00000563226 PPFIA2O75334 1257 aa20.21■□□□□ 0.83
SMPD3-203ENST00000563226 RFC1P35251 1148 aaPredicted RBP20.21■□□□□ 0.83
SMPD3-203ENST00000563226 SNX17Q15036 470 aa20.21■□□□□ 0.83
SMPD3-203ENST00000563226 CEP85LQ5SZL2 805 aa20.21■□□□□ 0.83
SMPD3-203ENST00000563226 HEXIM2Q96MH2 286 aaKnown RBP20.21■□□□□ 0.83
SMPD3-203ENST00000563226 RUNDC3BQ96NL0 473 aa20.21■□□□□ 0.83
SMPD3-203ENST00000563226 ATP8A1Q9Y2Q0 1164 aa20.21■□□□□ 0.83
SMPD3-203ENST00000563226 PASKQ96RG2 1323 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 RECQL4O94761 1208 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 AKAP5P24588 427 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 PSMC1P62191 440 aaKnown RBP20.2■□□□□ 0.82
SMPD3-203ENST00000563226 KRT17Q04695 432 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 XYLT1Q86Y38 959 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 TRPV1Q8NER1 839 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 UBA3Q8TBC4 463 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 SLCO2A1Q92959 643 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 PLEKHA5Q9HAU0 1116 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 STRIP2Q9ULQ0 834 aa20.2■□□□□ 0.82
SMPD3-203ENST00000563226 KRT10P13645 584 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms