RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 ACAD10Q6JQN1 1059 aa14.81□□□□□ -0.04
CLK3-209ENST00000562670 PSRC1Q6PGN9 363 aaPredicted RBP14.81□□□□□ -0.04
CLK3-209ENST00000562670 LCLAT1Q6UWP7 414 aa14.81□□□□□ -0.04
CLK3-209ENST00000562670 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.81□□□□□ -0.045e-12■■□□□ 14.3
CLK3-209ENST00000562670 ZNF280BQ86YH2 543 aa14.81□□□□□ -0.04
CLK3-209ENST00000562670 PHF13Q86YI8 300 aaPredicted RBP14.81□□□□□ -0.04
CLK3-209ENST00000562670 TMEM35BQ8NCS4 154 aa14.81□□□□□ -0.04
CLK3-209ENST00000562670 CTNNBL1Q8WYA6 563 aaPredicted RBP14.81□□□□□ -0.04
CLK3-209ENST00000562670 RFFLQ8WZ73 363 aa14.81□□□□□ -0.04
CLK3-209ENST00000562670 TFAP2BQ92481 460 aa14.81□□□□□ -0.04
CLK3-209ENST00000562670 ZNF689Q96CS4 500 aaPredicted RBP14.81□□□□□ -0.04
CLK3-209ENST00000562670 C16orf45Q96MC5 204 aaPredicted RBP14.81□□□□□ -0.04
CLK3-209ENST00000562670 NRDE2Q9H7Z3 1164 aa14.81□□□□□ -0.04
CLK3-209ENST00000562670 LZTFL1Q9NQ48 299 aa14.81□□□□□ -0.04
CLK3-209ENST00000562670 GTF3C4Q9UKN8 822 aa14.81□□□□□ -0.04
CLK3-209ENST00000562670 PCDHB8Q9UN66 801 aa14.81□□□□□ -0.04
CLK3-209ENST00000562670 NME7Q9Y5B8 376 aa14.81□□□□□ -0.04
CLK3-209ENST00000562670 A0A0U1RQJ8 604 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 A8MXQ7 604 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 TRAPPC3O43617 180 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 FTLP02792 175 aaPredicted RBP14.8□□□□□ -0.04
CLK3-209ENST00000562670 SETSIPP0DME0 302 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 CD19P15391 556 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 IBSPP21815 317 aaPredicted RBP14.8□□□□□ -0.04
CLK3-209ENST00000562670 PCSK1P29120 753 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 GNL1P36915 607 aaPredicted RBP14.8□□□□□ -0.04
CLK3-209ENST00000562670 NSFP46459 744 aaKnown RBP14.8□□□□□ -0.04
CLK3-209ENST00000562670 GALCP54803 685 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 GSCP56915 257 aaPredicted RBP14.8□□□□□ -0.04
CLK3-209ENST00000562670 FPGSQ05932 587 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 C1QBPQ07021 282 aaKnown RBP14.8□□□□□ -0.04
CLK3-209ENST00000562670 WSCD1Q658N2 575 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 DSTYKQ6XUX3 929 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 MON1BQ7L1V2 547 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 RHOT2Q8IXI1 618 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 CMTR2Q8IYT2 770 aaKnown RBP14.8□□□□□ -0.04
CLK3-209ENST00000562670 OR6B3Q8NGW1 331 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 ATRIPQ8WXE1 791 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 SECISBP2LQ93073 1101 aaKnown RBP14.8□□□□□ -0.04
CLK3-209ENST00000562670 PACSIN1Q9BY11 444 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 AVENQ9NQS1 362 aaPredicted RBP14.8□□□□□ -0.04
CLK3-209ENST00000562670 TAS2R14Q9NYV8 317 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 CACNG4Q9UBN1 327 aa14.8□□□□□ -0.04
CLK3-209ENST00000562670 TBKBP1A7MCY6 615 aa14.79□□□□□ -0.04
CLK3-209ENST00000562670 SYN3O14994 580 aa14.79□□□□□ -0.04
CLK3-209ENST00000562670 MTA2O94776 668 aa14.79□□□□□ -0.04
CLK3-209ENST00000562670 ELAVL2Q12926 359 aaKnown RBP14.79□□□□□ -0.04
CLK3-209ENST00000562670 IFI16Q16666 785 aaKnown RBP14.79□□□□□ -0.04
CLK3-209ENST00000562670 OSTM1Q86WC4 334 aa14.79□□□□□ -0.04
CLK3-209ENST00000562670 METTL23Q86XA0 190 aa14.79□□□□□ -0.04
CLK3-209ENST00000562670 B3GALNT2Q8NCR0 500 aa14.79□□□□□ -0.04
CLK3-209ENST00000562670 TRIM58Q8NG06 486 aa14.79□□□□□ -0.04
CLK3-209ENST00000562670 UBE2Q2Q8WVN8 375 aa14.79□□□□□ -0.04
CLK3-209ENST00000562670 COLEC11Q9BWP8 271 aa14.79□□□□□ -0.04
CLK3-209ENST00000562670 PDCL3Q9H2J4 239 aa14.79□□□□□ -0.04
CLK3-209ENST00000562670 RRAGDQ9NQL2 400 aaPredicted RBP14.79□□□□□ -0.04
CLK3-209ENST00000562670 PUF60Q9UHX1 559 aaKnown RBP14.79□□□□□ -0.04
CLK3-209ENST00000562670 ADAM28Q9UKQ2 775 aa14.79□□□□□ -0.04
CLK3-209ENST00000562670 CDH9Q9ULB4 789 aa14.79□□□□□ -0.04
CLK3-209ENST00000562670 PCDHGC5Q9Y5F6 944 aa14.79□□□□□ -0.04
CLK3-209ENST00000562670 SF3B1O75533 1304 aaKnown RBP eCLIP14.78□□□□□ -0.04
CLK3-209ENST00000562670 CALCAP01258 141 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 CYP1A2P05177 515 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 TNNT1P13805 278 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 MMP8P22894 467 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 OR1G1P47890 313 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 GPC5P78333 572 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 PKDCCQ504Y2 493 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 NAA35Q5VZE5 725 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 MCOLN2Q8IZK6 566 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 MSANTD4Q8NCY6 345 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 STK32AQ8WU08 396 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 CYFIP2Q96F07 1278 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 HEXIM2Q96MH2 286 aaKnown RBP14.78□□□□□ -0.04
CLK3-209ENST00000562670 NOX5Q96PH1 765 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 ACBD6Q9BR61 282 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 CYLDQ9NQC7 956 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 MARCH5Q9NX47 278 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 UVRAGQ9P2Y5 699 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 DNAJB4Q9UDY4 337 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 TRIM10Q9UDY6 481 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 GUCA1BQ9UMX6 200 aa14.78□□□□□ -0.04
CLK3-209ENST00000562670 NRP1O14786 923 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 MICAL2O94851 1124 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 OAZ2O95190 189 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 EFEMP2O95967 443 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 ABL1P00519 1130 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 ALDH2P05091 517 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 ITGB1P05556 798 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 CALB1P05937 261 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 GALTP07902 379 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 CFHP08603 1231 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 IGFBP6P24592 240 aaPredicted RBP14.77□□□□□ -0.05
CLK3-209ENST00000562670 BRCC3P46736 316 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 SLC11A1P49279 550 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 GATMP50440 423 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 BCAT1P54687 386 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 DEFB103AP81534 67 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 PTP4A2Q12974 167 aa14.77□□□□□ -0.05
CLK3-209ENST00000562670 ACOT1Q86TX2 421 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms