RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 BTKQ06187 659 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 CDC16Q13042 620 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 SAMD7Q7Z3H4 446 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 TRIM51Q9BSJ1 452 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 COPS7BQ9H9Q2 264 aaPredicted RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 EXOSC4Q9NPD3 245 aaKnown RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 ADAM21Q9UKJ8 722 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 RASSF10A6NK89 507 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 GPR182O15218 404 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 ATXN3P54252 364 aaPredicted RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 SMTNL2Q2TAL5 461 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 EFL1Q7Z2Z2 1120 aaKnown RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 CNPY4Q8N129 248 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 C4orf33Q8N1A6 199 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 RPRD1AQ96P16 312 aaPredicted RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 FAM118BQ9BPY3 351 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 RANBP17Q9H2T7 1088 aaKnown RBP11.73□□□□□ -0.53
RPAP1-204ENST00000562303 IL1RL2Q9HB29 575 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 USE1Q9NZ43 259 aa11.73□□□□□ -0.53
RPAP1-204ENST00000562303 IGSF9BQ9UPX0 1349 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 VWA5AO00534 786 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 ITGB3P05106 788 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 SLC2A3P11169 496 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 PTGER2P43116 358 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 NPEPPSP55786 919 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 PWP1Q13610 501 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 LONRF1Q17RB8 773 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 ATG4CQ96DT6 458 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 YIPF3Q9GZM5 350 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 DMAP1Q9NPF5 467 aaPredicted RBP11.72□□□□□ -0.53
RPAP1-204ENST00000562303 F5H5T6 163 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 MTSS1O43312 755 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 DYRK3O43781 588 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 YY1P25490 414 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 EPHB2P29323 1055 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 S100A5P33763 92 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 SLC18A3Q16572 532 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 AGBL1Q96MI9 1066 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 YME1L1Q96TA2 773 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 TMEM8AQ9HCN3 771 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 CHST12Q9NRB3 414 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 GID8Q9NWU2 228 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 TRMT6Q9UJA5 497 aaKnown RBP11.72□□□□□ -0.53
RPAP1-204ENST00000562303 UBQLN1Q9UMX0 589 aaKnown RBP11.72□□□□□ -0.53
RPAP1-204ENST00000562303 SOAT2O75908 522 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 VCLP18206 1134 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 BRD2P25440 801 aaKnown RBP11.72□□□□□ -0.53
RPAP1-204ENST00000562303 AMHR2Q16671 573 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 SPATA4Q8NEY3 305 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 USP13Q92995 863 aaPredicted RBP11.72□□□□□ -0.53
RPAP1-204ENST00000562303 C9orf72Q96LT7 481 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 CCSER1Q9C0I3 900 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 DPP3Q9NY33 737 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 FBXO2Q9UK22 296 aaPredicted RBP11.72□□□□□ -0.53
RPAP1-204ENST00000562303 CFAP73A6NFT4 308 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 C2orf81A6NN90 581 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 MYO1CO00159 1063 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 AIM2O14862 343 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 EGFRP00533 1210 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 UCHL3P15374 230 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 DPEP1P16444 411 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 GUCA1AP43080 201 aaPredicted RBP11.72□□□□□ -0.53
RPAP1-204ENST00000562303 RUNX1T1Q06455 604 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 DMTNQ08495 405 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 CNTN1Q12860 1018 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 TRIM69Q86WT6 500 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 CARNMT1Q8N4J0 409 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 TNIP2Q8NFZ5 429 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 WNK4Q96J92 1243 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 MS4A14Q96JA4 679 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 WDCPQ9H6R7 721 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 ITIH6Q6UXX5 1313 aa11.72□□□□□ -0.53
RPAP1-204ENST00000562303 AGTP01019 485 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 RPS12P25398 132 aaKnown RBP11.71□□□□□ -0.53
RPAP1-204ENST00000562303 ALDH6A1Q02252 535 aaKnown RBP11.71□□□□□ -0.53
RPAP1-204ENST00000562303 TRAPPC11Q7Z392 1133 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 BLOC1S5Q8TDH9 187 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 C7orf25Q9BPX7 421 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 GGT7Q9UJ14 662 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 VPS9D1Q9Y2B5 631 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 PCDHB2Q9Y5E7 798 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 GOLGA8TH3BQL2 631 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 PMPCBO75439 489 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 TCN1P20061 433 aaPredicted RBP11.71□□□□□ -0.53
RPAP1-204ENST00000562303 PBLDP30039 288 aaPredicted RBP11.71□□□□□ -0.53
RPAP1-204ENST00000562303 PRIM2P49643 509 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 DDX39BQ13838 428 aaKnown RBP11.71□□□□□ -0.53
RPAP1-204ENST00000562303 GLRA4Q5JXX5 417 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 ZNF669Q96BR6 464 aaPredicted RBP11.71□□□□□ -0.53
RPAP1-204ENST00000562303 RBBP8Q99708 897 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 TMEM245Q9H330 911 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 PITPNM2Q9BZ72 1349 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 FAM47E-STBD1D6RA91 191 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 SLC26A4O43511 780 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 DEAF1O75398 565 aaPredicted RBP11.71□□□□□ -0.53
RPAP1-204ENST00000562303 ANXA9O76027 345 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 CKMP06732 381 aa11.71□□□□□ -0.53
RPAP1-204ENST00000562303 MRPS15P82914 257 aaKnown RBP11.71□□□□□ -0.53
RPAP1-204ENST00000562303 CAMK2GQ13555 558 aaPredicted RBP11.71□□□□□ -0.53
RPAP1-204ENST00000562303 TTC39BQ5VTQ0 682 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms