RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 DAG1Q14118 895 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 GRAMD1BQ3KR37 738 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 TSHZ1Q6ZSZ6 1077 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 RNF152Q8N8N0 203 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 CPEB3Q8NE35 698 aaKnown RBP7.66□□□□□ -1.18
SMG1-204ENST00000561940 OR6B3Q8NGW1 331 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 POF1BQ8WVV4 589 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 DPH1Q9BZG8 443 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 UNKQ9C0B0 810 aaKnown RBP7.66□□□□□ -1.18
SMG1-204ENST00000561940 CERS4Q9HA82 394 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 PNPLA8Q9NP80 782 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 CFAP97Q9P2B7 532 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 AATKQ6ZMQ8 1374 aa7.66□□□□□ -1.18
SMG1-204ENST00000561940 CCDC78A2IDD5 438 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 DIRC3C9JPN6 131 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 UNC5CO95185 931 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 IL18RAPO95256 599 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 SPATA31D3P0C874 917 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 ALAS1P13196 640 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 RPL17P18621 184 aaKnown RBP7.65□□□□□ -1.18
SMG1-204ENST00000561940 IL6STP40189 918 aaPredicted RBP7.65□□□□□ -1.18
SMG1-204ENST00000561940 FSTL1Q12841 308 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 SLC13A2Q13183 592 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 CTBP1Q13363 440 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 LY6G5CQ5SRR4 150 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 AGAP9Q5VTM2 703 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 HIBCHQ6NVY1 386 aaPredicted RBP7.65□□□□□ -1.18
SMG1-204ENST00000561940 ZNF783Q6ZMS7 281 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 SPATA31D4Q6ZUB0 917 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 RHOUQ7L0Q8 258 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 DPP9Q86TI2 863 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 TBC1D15Q8TC07 691 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 LENG9Q96B70 501 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 SUCLG2Q96I99 432 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 KLHL32Q96NJ5 620 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 CRB3Q9BUF7 120 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 STARD7Q9NQZ5 370 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 GJB4Q9NTQ9 266 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 PCDHGB2Q9Y5G2 931 aa7.65□□□□□ -1.18
SMG1-204ENST00000561940 E9PLN8 166 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 F5H423 210 aaPredicted RBP7.64□□□□□ -1.19
SMG1-204ENST00000561940 ELANEP08246 267 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 PARP1P09874 1014 aaKnown RBP7.64□□□□□ -1.19
SMG1-204ENST00000561940 HTRA4P83105 476 aaPredicted RBP7.64□□□□□ -1.19
SMG1-204ENST00000561940 RESTQ13127 1097 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 DHX8Q14562 1220 aaKnown RBP7.64□□□□□ -1.19
SMG1-204ENST00000561940 PTPAQ15257 358 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 LRRC55Q6ZSA7 311 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 MICU3Q86XE3 530 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 RHOT2Q8IXI1 618 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 ENAHQ8N8S7 591 aaPredicted RBP7.64□□□□□ -1.19
SMG1-204ENST00000561940 NLGN4YQ8NFZ3 816 aaPredicted RBP7.64□□□□□ -1.19
SMG1-204ENST00000561940 NMD3Q96D46 503 aaKnown RBP7.64□□□□□ -1.19
SMG1-204ENST00000561940 MYEOVQ96EZ4 313 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 MSLNLQ96KJ4 702 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 VKORC1Q9BQB6 163 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 TLR10Q9BXR5 811 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 TINAGL1Q9GZM7 467 aaPredicted RBP7.64□□□□□ -1.19
SMG1-204ENST00000561940 REXO4Q9GZR2 422 aaKnown RBP7.64□□□□□ -1.19
SMG1-204ENST00000561940 PPCSQ9HAB8 311 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 GPR35Q9HC97 309 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 RLIMQ9NVW2 624 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 FPGT-TNNI3KV9GXZ4 949 aa7.64□□□□□ -1.19
SMG1-204ENST00000561940 TRIM43BA6NCK2 446 aa7.63□□□□□ -1.19
SMG1-204ENST00000561940 M0QYG6 137 aa7.63□□□□□ -1.19
SMG1-204ENST00000561940 GNAI2P04899 355 aa7.63□□□□□ -1.19
SMG1-204ENST00000561940 HABP2Q14520 560 aaPredicted RBP7.63□□□□□ -1.19
SMG1-204ENST00000561940 BEAN1Q3B7T3 259 aa7.63□□□□□ -1.19
SMG1-204ENST00000561940 NOMO2Q5JPE7 1267 aa7.63□□□□□ -1.19
SMG1-204ENST00000561940 IZUMO3Q5VZ72 239 aa7.63□□□□□ -1.19
SMG1-204ENST00000561940 MAPKAPK5Q8IW41 473 aa7.63□□□□□ -1.19
SMG1-204ENST00000561940 FITM2Q8N6M3 262 aa7.63□□□□□ -1.19
SMG1-204ENST00000561940 SLC17A8Q8NDX2 589 aa7.63□□□□□ -1.19
SMG1-204ENST00000561940 TRIM43Q96BQ3 446 aaPredicted RBP7.63□□□□□ -1.19
SMG1-204ENST00000561940 MARS2Q96GW9 593 aaKnown RBP7.63□□□□□ -1.19
SMG1-204ENST00000561940 TTPALQ9BTX7 342 aa7.63□□□□□ -1.19
SMG1-204ENST00000561940 IMPG2Q9BZV3 1241 aa7.63□□□□□ -1.19
SMG1-204ENST00000561940 TRMT13Q9NUP7 481 aaKnown RBP7.63□□□□□ -1.19
SMG1-204ENST00000561940 A0A1B0GTW7 788 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 GAGE12BA1L429 117 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 GAGE12HA6NDE8 117 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 TMEM200CA6NKL6 621 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 FOXN3O00409 490 aaPredicted RBP7.62□□□□□ -1.19
SMG1-204ENST00000561940 APOL1O14791 398 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 TBC1D4O60343 1298 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 TCEA3O75764 348 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 HARSP12081 509 aaKnown RBP7.62□□□□□ -1.19
SMG1-204ENST00000561940 FGFR4P22455 802 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 PPM1AP35813 382 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 UCP3P55916 312 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 TGFB2P61812 414 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 HSD11B2P80365 405 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 SLFN5Q08AF3 891 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 TUBB8Q3ZCM7 444 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 Q6ZPA2 131 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 USP37Q86T82 979 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 PDSS2Q86YH6 399 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 OR56A3Q8NH54 315 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 WDR11Q9BZH6 1224 aa7.62□□□□□ -1.19
SMG1-204ENST00000561940 WDR12Q9GZL7 423 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms