RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 MPHOSPH9Q99550 1183 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 MNTQ99583 582 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 ELAC2Q9BQ52 826 aaKnown RBP4.56□□□□□ -1.68
HERC1-215ENST00000561436 LRFN3Q9BTN0 628 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 PIH1D1Q9NWS0 290 aaKnown RBP4.56□□□□□ -1.68
HERC1-215ENST00000561436 CFAP97Q9P2B7 532 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 CPA4Q9UI42 421 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 OGDHLQ9ULD0 1010 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 REXO2Q9Y3B8 237 aaKnown RBP4.56□□□□□ -1.68
HERC1-215ENST00000561436 PAXBP1Q9Y5B6 917 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 ROBO1Q9Y6N7 1651 aa4.56□□□□□ -1.68
HERC1-215ENST00000561436 COL16A1Q07092 1604 aaPredicted RBP4.56□□□□□ -1.68
HERC1-215ENST00000561436 PTPRUQ92729 1446 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 METP08581 1390 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 KRTAP23-1A1A580 65 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 A6NNZ2 444 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 KIAA0391O15091 583 aaKnown RBP4.55□□□□□ -1.68
HERC1-215ENST00000561436 TPD52L2O43399 206 aaKnown RBP4.55□□□□□ -1.68
HERC1-215ENST00000561436 NARSO43776 548 aaKnown RBP4.55□□□□□ -1.68
HERC1-215ENST00000561436 MFAP3LO75121 409 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 ZNF202O95125 648 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 GNAI2P04899 355 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 MGAT1P26572 445 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 PCSK1P29120 753 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 SLC7A1P30825 629 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 ALDH1A3P47895 512 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 PIK3CGP48736 1102 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 CLRN1P58418 232 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 ZNF280AP59817 542 aaPredicted RBP4.55□□□□□ -1.68
HERC1-215ENST00000561436 NKX6-1P78426 367 aaPredicted RBP4.55□□□□□ -1.68
HERC1-215ENST00000561436 ATP8B2P98198 1209 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 SNAPC2Q13487 334 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 TOB2Q14106 344 aaPredicted RBP4.55□□□□□ -1.68
HERC1-215ENST00000561436 GALEQ14376 348 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 PLS1Q14651 629 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 VPS72Q15906 364 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 KHDC1LQ5JSQ8 128 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 MIIPQ5JXC2 388 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 MFSD14BQ5SR56 506 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 DACT2Q5SW24 774 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 SEM1Q6ZVN7 128 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 APBB1IPQ7Z5R6 666 aaPredicted RBP4.55□□□□□ -1.68
HERC1-215ENST00000561436 FAM83AQ86UY5 434 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 TMPRSS6Q8IU80 811 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 KRT78Q8N1N4 520 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 ANKRD35Q8N283 1001 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 MDGA1Q8NFP4 955 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 SLC35B2Q8TB61 432 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 MYD88Q99836 296 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 MRI1Q9BV20 369 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 TEX101Q9BY14 249 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 REXO4Q9GZR2 422 aaKnown RBP4.55□□□□□ -1.68
HERC1-215ENST00000561436 BTBD1Q9H0C5 482 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 SIK2Q9H0K1 926 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 ZNF768Q9H5H4 540 aaKnown RBP4.55□□□□□ -1.68
HERC1-215ENST00000561436 MYH16Q9H6N6 1097 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 MMRN2Q9H8L6 949 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 ZNF287Q9HBT7 754 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 KIAA1586Q9HCI6 787 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 RLIMQ9NVW2 624 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 ZDHHC8Q9ULC8 765 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 SORCS3Q9UPU3 1222 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 PCDHGB6Q9Y5F9 930 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 SNX13Q9Y5W8 968 aa4.55□□□□□ -1.68
HERC1-215ENST00000561436 RHPN2P1A8MT19 583 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 ISM1B1AKI9 464 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 LEFTY2O00292 366 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 GRM6O15303 877 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 EIF3JO75822 258 aaKnown RBP4.54□□□□□ -1.68
HERC1-215ENST00000561436 POMCP01189 267 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 FPR1P21462 350 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 PRDX5P30044 214 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 APOBEC3AP31941 199 aaPredicted RBP4.54□□□□□ -1.68
HERC1-215ENST00000561436 KCNJ5P48544 419 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 MXRA7P84157 204 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 HABP2Q14520 560 aaPredicted RBP4.54□□□□□ -1.68
HERC1-215ENST00000561436 SLC44A4Q53GD3 710 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 EFCAB12Q6NXP0 572 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 ZNF529Q6P280 563 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 DOK3Q7L591 496 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 FAM186BQ8IYM0 893 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 TFAP2CQ92754 450 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 PMM1Q92871 262 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 TNPO1Q92973 898 aaKnown RBP4.54□□□□□ -1.68
HERC1-215ENST00000561436 APIPQ96GX9 242 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 DMRTA2Q96SC8 542 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 STRBPQ96SI9 672 aaKnown RBP4.54□□□□□ -1.68
HERC1-215ENST00000561436 BHMT2Q9H2M3 363 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 SPON1Q9HCB6 807 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 SLAMF7Q9NQ25 335 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 STAP2Q9UGK3 403 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 PHTF1Q9UMS5 762 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 PCDHA1Q9Y5I3 950 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 SRCAPQ6ZRS2 3230 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 LRRIQ1Q96JM4 1722 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 BCL9LQ86UU0 1499 aa4.54□□□□□ -1.68
HERC1-215ENST00000561436 XDHP47989 1333 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 GRXCR1A8MXD5 290 aa4.53□□□□□ -1.68
HERC1-215ENST00000561436 CXorf49A8MYA2 514 aaPredicted RBP4.53□□□□□ -1.68
HERC1-215ENST00000561436 F2RL2O00254 374 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms