RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 DMAC2Q9NW81 257 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 GDAP2Q9NXN4 497 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 DDX43Q9NXZ2 648 aaKnown RBP13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 MAPK8IP1Q9UQF2 711 aa13.62□□□□□ -0.23
CHRNA3-208ENST00000561128 NUP210Q8TEM1 1887 aaPredicted RBP13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 PTPRDP23468 1912 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 LRRIQ3A6PVS8 624 aaPredicted RBP13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 GABRDO14764 452 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 KIAA0391O15091 583 aaKnown RBP13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 TADA3O75528 432 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 VNN1O95497 513 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 HAPLN1P10915 354 aaPredicted RBP13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 LMO2P25791 158 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 VIPR2P41587 438 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 RBP5P82980 135 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 PLD1Q13393 1074 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 MGAT5BQ3V5L5 792 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 INTS6LQ5JSJ4 861 aaKnown RBP13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 TDRD10Q5VZ19 366 aaKnown RBP13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 TMEM150AQ86TG1 271 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 RIN3Q8TB24 985 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 HPDLQ96IR7 371 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 ANKRD36BP1Q96IX9 119 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 LRRC3BQ96PB8 259 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 MRPL45Q9BRJ2 306 aaKnown RBP13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 PI4K2AQ9BTU6 479 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 XYLT2Q9H1B5 865 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 CRTAC1Q9NQ79 661 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 ASAH2Q9NR71 780 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 ARHGEF3Q9NR81 526 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 TMEM30AQ9NV96 361 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 DSEQ9UL01 958 aa13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 MTF2Q9Y483 593 aaPredicted RBP13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 ARIH1Q9Y4X5 557 aaPredicted RBP13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 ZFP37Q9Y6Q3 630 aaPredicted RBP13.61□□□□□ -0.23
CHRNA3-208ENST00000561128 MYBPHLA2RUH7 354 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 RHOBTB3O94955 611 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 ZNF202O95125 648 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 PRAMEF12O95522 483 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 NR3C1P04150 777 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 GLULP15104 373 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 HMGA1P17096 107 aaKnown RBP13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 AOC1P19801 751 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 CD72P21854 359 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 PNPLA4P41247 253 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 MYL6P60660 151 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 PNOCQ13519 176 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 SNW1Q13573 536 aaKnown RBP13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 MTSS1LQ765P7 747 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 HS2ST1Q7LGA3 356 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 DNAJB7Q7Z6W7 309 aaPredicted RBP13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 METTL23Q86XA0 190 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 FMR1NBQ8N0W7 255 aaPredicted RBP13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 ZSCAN18Q8TBC5 510 aaPredicted RBP13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 CACTINQ8WUQ7 758 aaKnown RBP13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 PSMG2Q969U7 264 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 NXPE3Q969Y0 559 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 ZNF512Q96ME7 567 aaPredicted RBP13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 OXCT2Q9BYC2 517 aaPredicted RBP13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 SCAND2PQ9GZW5 306 aaPredicted RBP13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 SMG9Q9H0W8 520 aaKnown RBP13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 SDCBP2Q9H190 292 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 MFSD1Q9H3U5 465 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 DPEP3Q9H4B8 488 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 SMYD3Q9H7B4 428 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 GDE1Q9NZC3 331 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 WNT16Q9UBV4 365 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 USP25Q9UHP3 1055 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 GTF3C4Q9UKN8 822 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 MAFFQ9ULX9 164 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 PATJQ8NI35 1801 aa13.6□□□□□ -0.23
CHRNA3-208ENST00000561128 DENND4CQ5VZ89 1909 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 H0Y858 1186 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 EXOC3O60645 756 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 ECI2O75521 394 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 TNNC2P02585 160 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 DCNP07585 359 aaKnown RBP13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 PAX3P23760 479 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 CYP2F1P24903 491 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 RAP1GAPP47736 663 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 CACNA2D1P54289 1103 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 EPHB3P54753 998 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 DUOXA2Q1HG44 320 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 ZCWPW2Q504Y3 356 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 ENGASEQ8NFI3 743 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 PARD3BQ8TEW8 1205 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 KIAA1586Q9HCI6 787 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 DLGAP2Q9P1A6 1054 aa13.59□□□□□ -0.23
CHRNA3-208ENST00000561128 GREB1Q4ZG55 1949 aa13.58□□□□□ -0.23
CHRNA3-208ENST00000561128 ARNTLO00327 626 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 GALR2O43603 387 aaPredicted RBP13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 HUS1O60921 280 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 TNNI1P19237 187 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 GABRR2P28476 465 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 ALDH1A3P47895 512 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 BECN1Q14457 450 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 DDR2Q16832 855 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 CYP4A22Q5TCH4 519 aa13.58□□□□□ -0.24
CHRNA3-208ENST00000561128 IQCEQ6IPM2 695 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms