RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 E5RJQ4 531 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 LPXNO60711 386 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 GLRA2P23416 452 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 EFHC2Q5JST6 749 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 C1orf146Q5VVC0 180 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 C3orf62Q6ZUJ4 267 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 RAPH1Q70E73 1250 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 NLRX1Q86UT6 975 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 BANPQ8N9N5 519 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 PYROXD1Q8WU10 500 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 TMEM121Q9BTD3 319 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 PHACTR1Q9C0D0 580 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 SGK1O00141 431 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 YY1P25490 414 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 NSFP46459 744 aaKnown RBP17.34■□□□□ 0.37
TPM1-228ENST00000560975 NFX1Q12986 1120 aaKnown RBP17.34■□□□□ 0.37
TPM1-228ENST00000560975 MTMR2Q13614 643 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 MARK2Q7KZI7 788 aaKnown RBP17.34■□□□□ 0.37
TPM1-228ENST00000560975 ZFPM1Q8IX07 1006 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 ST13P4Q8IZP2 240 aaPredicted RBP17.34■□□□□ 0.37
TPM1-228ENST00000560975 NMD3Q96D46 503 aaKnown RBP17.34■□□□□ 0.37
TPM1-228ENST00000560975 VPS11Q9H270 941 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 TMEM206Q9H813 350 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 GALNT8Q9NY28 637 aa17.34■□□□□ 0.37
TPM1-228ENST00000560975 SMCHD1A6NHR9 2005 aa17.33■□□□□ 0.37
TPM1-228ENST00000560975 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.33■□□□□ 0.36
TPM1-228ENST00000560975 DNAJC6O75061 913 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 CFHP08603 1231 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 UNGP13051 313 aaPredicted RBP17.33■□□□□ 0.36
TPM1-228ENST00000560975 AP2B1P63010 937 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 KRT72Q14CN4 511 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 MSS51Q4VC12 460 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 PABPC1LQ4VXU2 614 aaKnown RBP17.33■□□□□ 0.36
TPM1-228ENST00000560975 C6orf163Q5TEZ5 329 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 KRT39Q6A163 491 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.33■□□□□ 0.36
TPM1-228ENST00000560975 ZBTB21Q9ULJ3 1066 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 PHF24Q9UPV7 400 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 KITP10721 976 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 LSAMPQ13449 338 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 HIF1AQ16665 826 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 RNASEH2BQ5TBB1 312 aaKnown RBP17.33■□□□□ 0.36
TPM1-228ENST00000560975 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.36
TPM1-228ENST00000560975 POMGNT1Q8WZA1 660 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 IWS1Q96ST2 819 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 NARFQ9UHQ1 456 aa17.33■□□□□ 0.36
TPM1-228ENST00000560975 DENND3A2RUS2 1198 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 SLC16A4O15374 487 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 OR6B1O95007 311 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 MT-ND3P03897 115 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 ARP10275 920 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 HARSP12081 509 aaKnown RBP17.32■□□□□ 0.36
TPM1-228ENST00000560975 RAP1GDS1P52306 607 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 CACNB3P54284 484 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 DEUP1Q05D60 604 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 NFIAQ12857 509 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 MORF4L2Q15014 288 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 SNRNP35Q16560 246 aaKnown RBP17.32■□□□□ 0.36
TPM1-228ENST00000560975 MFSD7Q6UXD7 560 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 ISLR2Q6UXK2 745 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 RASSF3Q86WH2 238 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 RHPN2Q8IUC4 686 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 ULK2Q8IYT8 1036 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 ALLCQ8N6M5 410 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 KLHL23Q8NBE8 558 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.32■□□□□ 0.36
TPM1-228ENST00000560975 NCSTNQ92542 709 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 GINM1Q9NU53 330 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 MARCOQ9UEW3 520 aaPredicted RBP17.32■□□□□ 0.36
TPM1-228ENST00000560975 SLC7A8Q9UHI5 535 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 GGA1Q9UJY5 639 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 IL1R1P14778 569 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 INHBCP55103 352 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 USP46P62068 366 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 TCP10Q12799 353 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 MYBPC2Q14324 1141 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 FNBP1LQ5T0N5 605 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 ANKRD22Q5VYY1 191 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 TMPRSS6Q8IU80 811 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 KATNAL2Q8IYT4 538 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 DCAF4Q8WV16 495 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 HIC2Q96JB3 615 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 CLIC5Q9NZA1 410 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 COMMD3-BMI1R4GMX3 469 aa17.32■□□□□ 0.36
TPM1-228ENST00000560975 TMEM150BA6NC51 233 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 MEI4A8MW99 385 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 RIMBP2O15034 1052 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 TM9SF1O15321 606 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 HNRNPRO43390 633 aaKnown RBP17.31■□□□□ 0.36
TPM1-228ENST00000560975 PSTPIP1O43586 416 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 KRT1P04264 644 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 HLA-DOAP06340 250 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 GRIA2P42262 883 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 MYBPC3Q14896 1274 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 PRKD1Q15139 912 aaPredicted RBP17.31■□□□□ 0.36
TPM1-228ENST00000560975 FAM182AQ5T1J6 154 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 HAUS6Q7Z4H7 955 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 SATL1Q86VE3 508 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 SPATA24Q86W54 205 aa17.31■□□□□ 0.36
TPM1-228ENST00000560975 LARGE2Q8N3Y3 721 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms