RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 DMGDHQ9UI17 866 aaKnown RBP13.69□□□□□ -0.22
SNX1-211ENST00000560829 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.69□□□□□ -0.22
SNX1-211ENST00000560829 SNX9Q9Y5X1 595 aa13.69□□□□□ -0.22
SNX1-211ENST00000560829 SQORQ9Y6N5 450 aa13.69□□□□□ -0.22
SNX1-211ENST00000560829 KRIT1O00522 736 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 PTGESO14684 152 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 MICAL2O94851 1124 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 FGGP02679 453 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
SNX1-211ENST00000560829 HSPA6P17066 643 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 TNFRSF8P28908 595 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 THPOP40225 353 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 GPD2P43304 727 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 RWDD2BP57060 319 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 SOX4Q06945 474 aaPredicted RBP13.68□□□□□ -0.22
SNX1-211ENST00000560829 NFX1Q12986 1120 aaKnown RBP13.68□□□□□ -0.22
SNX1-211ENST00000560829 ORC1Q13415 861 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 LONRF2Q1L5Z9 754 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 PTPN20Q4JDL3 420 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 LCLAT1Q6UWP7 414 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 CCNI2Q6ZMN8 369 aaPredicted RBP13.68□□□□□ -0.22
SNX1-211ENST00000560829 MRPL10Q7Z7H8 261 aaKnown RBP13.68□□□□□ -0.22
SNX1-211ENST00000560829 CPNE8Q86YQ8 564 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 SLC43A3Q8NBI5 491 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 HDAC7Q8WUI4 952 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 HEXIM2Q96MH2 286 aaKnown RBP13.68□□□□□ -0.22
SNX1-211ENST00000560829 GLT1D1Q96MS3 346 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 CYTH4Q9UIA0 394 aa13.68□□□□□ -0.22
SNX1-211ENST00000560829 KPNA7A9QM74 516 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 RRP9O43818 475 aaKnown RBP13.67□□□□□ -0.22
SNX1-211ENST00000560829 ZNF623O75123 536 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 GABRB2P47870 512 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 TAF6P49848 677 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 DSC3Q14574 896 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 PPP2R5EQ16537 467 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 SOWAHAQ2M3V2 549 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 DNAJC24Q6P3W2 148 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 PHLDB2Q86SQ0 1253 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 ZNF784Q8NCA9 323 aaPredicted RBP13.67□□□□□ -0.22
SNX1-211ENST00000560829 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.67□□□□□ -0.22
SNX1-211ENST00000560829 ZNF296Q8WUU4 475 aaPredicted RBP13.67□□□□□ -0.22
SNX1-211ENST00000560829 KRT12Q99456 494 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 MRPL45Q9BRJ2 306 aaKnown RBP13.67□□□□□ -0.22
SNX1-211ENST00000560829 SLITRK6Q9H5Y7 841 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 HMX1Q9NP08 348 aaPredicted RBP13.67□□□□□ -0.22
SNX1-211ENST00000560829 FAM53CQ9NYF3 392 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 WDR35Q9P2L0 1181 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 IP6K2Q9UHH9 426 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 PADI3Q9ULW8 664 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 L1RE1Q9UN81 338 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 HTTP42858 3142 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 SPTLC1O15269 473 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 SEC31AO94979 1220 aaKnown RBP13.67□□□□□ -0.22
SNX1-211ENST00000560829 FAM163BP0C2L3 166 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 PYGMP11217 842 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 ITGA4P13612 1032 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 RAB27AP51159 221 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 ZNF211Q13398 564 aaPredicted RBP13.67□□□□□ -0.22
SNX1-211ENST00000560829 LPIN1Q14693 890 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 SV2CQ496J9 727 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 SEL1L2Q5TEA6 688 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 DPH6Q7L8W6 267 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 GSTCDQ8NEC7 633 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 AP1M1Q9BXS5 423 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 TRMT13Q9NUP7 481 aaKnown RBP13.67□□□□□ -0.22
SNX1-211ENST00000560829 SLC38A7Q9NVC3 462 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 GIT1Q9Y2X7 761 aa13.67□□□□□ -0.22
SNX1-211ENST00000560829 BHMG1C9JSJ3 638 aaPredicted RBP13.66□□□□□ -0.22
SNX1-211ENST00000560829 M0QYV0 167 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 SART1O43290 800 aaKnown RBP13.66□□□□□ -0.22
SNX1-211ENST00000560829 PSTPIP1O43586 416 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 GRK4P32298 578 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 RPL7AP62424 266 aaKnown RBP13.66□□□□□ -0.22
SNX1-211ENST00000560829 PDCLQ13371 301 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 ZNF268Q14587 947 aaPredicted RBP13.66□□□□□ -0.22
SNX1-211ENST00000560829 MAP9Q49MG5 647 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 PKDCCQ504Y2 493 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 ARHGAP17Q68EM7 881 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 NIPA2Q8N8Q9 360 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 KBTBD7Q8WVZ9 684 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 C18orf8Q96DM3 657 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 DDX27Q96GQ7 796 aaKnown RBP13.66□□□□□ -0.22
SNX1-211ENST00000560829 CPXM1Q96SM3 734 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 PLVAPQ9BX97 442 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 FUT8Q9BYC5 575 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 OSBPL7Q9BZF2 842 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 GDF3Q9NR23 364 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 RNF19AQ9NV58 838 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 NOD1Q9Y239 953 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.66□□□□□ -0.22
SNX1-211ENST00000560829 NME7Q9Y5B8 376 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 CENPFP49454 3210 aa13.66□□□□□ -0.22
SNX1-211ENST00000560829 TRIP12Q14669 1992 aaPredicted RBP13.66□□□□□ -0.22
SNX1-211ENST00000560829 RAD51CO43502 376 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 GHRP10912 638 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 CD52P31358 61 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 LILRA4P59901 499 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 PAK2Q13177 524 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 RHOT1Q8IXI2 618 aa13.65□□□□□ -0.22
SNX1-211ENST00000560829 KLHL7Q8IXQ5 586 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms