RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 MTSS1LQ765P7 747 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 DPH6Q7L8W6 267 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 LRRTM3Q86VH5 581 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 NPAS3Q8IXF0 933 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 SPPL2BQ8TCT7 592 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 C2orf15Q8WU43 125 aaKnown RBP13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 ZNF516Q92618 1163 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 NXPE3Q969Y0 559 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 SYAP1Q96A49 352 aaPredicted RBP13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 TCEAL4Q96EI5 215 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 ACBD6Q9BR61 282 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 SNX25Q9H3E2 840 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 GTF3C4Q9UKN8 822 aa13.91□□□□□ -0.18
CTDSPL2-209ENST00000560620 STK25O00506 426 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 NARSO43776 548 aaKnown RBP13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 VNN2O95498 520 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 CFHP08603 1231 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 PDGFRBP09619 1106 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 GJA1P17302 382 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 CEBPBP17676 345 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 RFX1P22670 979 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 PSMC2P35998 433 aaKnown RBP13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 PRCPP42785 496 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 VAMP7P51809 220 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 MYL6P60660 151 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 DLG4P78352 724 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 STIM1Q13586 685 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 NFE2Q16621 373 aaPredicted RBP13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 ZNF699Q32M78 642 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 PARM1Q6UWI2 310 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 ITIH5Q86UX2 942 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 SPATA2LQ8IUW3 424 aaPredicted RBP13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 FAM186BQ8IYM0 893 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 SLC44A3Q8N4M1 653 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 LEMD2Q8NC56 503 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 OR6B3Q8NGW1 331 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 PLEKHO2Q8TD55 490 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 GIPC2Q8TF65 315 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 FGF14Q92915 247 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 EEF2KMTQ96G04 330 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 TSG101Q99816 390 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 PI4K2AQ9BTU6 479 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 MMRN2Q9H8L6 949 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 GDE1Q9NZC3 331 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 RAPGEFL1Q9UHV5 662 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 DUSP12Q9UNI6 340 aa13.9□□□□□ -0.18
CTDSPL2-209ENST00000560620 DOCK8Q8NF50 2099 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 HCRTO43612 131 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 AKAP3O75969 853 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 ATICP31939 592 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 PSMC1P62191 440 aaKnown RBP13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 HTR4Q13639 388 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 NCOA4Q13772 614 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 INTS6LQ5JSJ4 861 aaKnown RBP13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 TDRD10Q5VZ19 366 aaKnown RBP13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 INTS8Q75QN2 995 aaKnown RBP13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 OSTM1Q86WC4 334 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 SPATA18Q8TC71 538 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 TMC2Q8TDI7 906 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 GPR152Q8TDT2 470 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 PSMG2Q969U7 264 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 ASIC4Q96FT7 647 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 GCNAQ96QF7 691 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 KXD1Q9BQD3 176 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 LPIN3Q9BQK8 851 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 SYT15Q9BQS2 421 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 GTPBP4Q9BZE4 634 aaKnown RBP13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 TMLHEQ9NVH6 421 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 HSFX1Q9UBD0 423 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 ASB3Q9Y575 518 aa13.89□□□□□ -0.19
CTDSPL2-209ENST00000560620 A0A1W2PRU2 124 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 ANHXE9PGG2 379 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 BIN1O00499 593 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 GABRDO14764 452 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 IKBKBO14920 756 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 CETN3O15182 167 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 HAPLN1P10915 354 aaPredicted RBP13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 EPB41P11171 864 aaKnown RBP13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 P4HA1P13674 534 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 LMO2P25791 158 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 GNL1P36915 607 aaPredicted RBP13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 CCR2P41597 374 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 PIK3CAP42336 1068 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 UBE2HP62256 183 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 CYP27A1Q02318 531 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 TEAD2Q15562 447 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 MAPRE1Q15691 268 aaKnown RBP13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 EDRF1Q3B7T1 1238 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 ZNF667Q5HYK9 610 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 PRSS36Q5K4E3 855 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 SCARA5Q6ZMJ2 495 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 DNAJB7Q7Z6W7 309 aaPredicted RBP13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 SCN4BQ8IWT1 228 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 FBXL6Q8N531 539 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 FLCNQ8NFG4 579 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 TMEM174Q8WUU8 243 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 KBTBD7Q8WVZ9 684 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 ELMO3Q96BJ8 720 aa13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 RPP25Q9BUL9 199 aaKnown RBP13.88□□□□□ -0.19
CTDSPL2-209ENST00000560620 IMPG2Q9BZV3 1241 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms