RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 SMAD2Q15796 467 aaKnown RBP14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 WDR44Q5JSH3 913 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 ATAT1Q5SQI0 421 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 PTCRAQ6ISU1 281 aaPredicted RBP14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 RSPO2Q6UXX9 243 aaPredicted RBP14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 GPR149Q86SP6 731 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 DHX40Q8IX18 779 aaKnown RBP14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 SPPL2BQ8TCT7 592 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 SUSD6Q92537 303 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 S1PR5Q9H228 398 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 CYP3A43Q9HB55 503 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 ABCB6Q9NP58 842 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 RAB20Q9NX57 234 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 DDX43Q9NXZ2 648 aaKnown RBP14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 MAGEC2Q9UBF1 373 aaPredicted RBP14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 CDH9Q9ULB4 789 aa14.97□□□□□ -0.01
PKNOX1-209ENST00000560448 PLXNA3P51805 1871 aa14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 C8AP07357 584 aa14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 FMO5P49326 533 aa14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 TUFMP49411 452 aaKnown RBP14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 CBX2Q14781 532 aaPredicted RBP14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 HS1BP3Q53T59 392 aa14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 INTS6LQ5JSJ4 861 aaKnown RBP14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 PPM1LQ5SGD2 360 aa14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 UNC93AQ86WB7 457 aa14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 GLYCTKQ8IVS8 523 aa14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 TMEM130Q8N3G9 435 aa14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 TAS1R2Q8TE23 839 aa14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 FUBP3Q96I24 572 aaKnown RBP eCLIP14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 CEP295NLQ96MC4 621 aa14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 PRKD2Q9BZL6 878 aa14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 NIF3L1Q9GZT8 377 aa14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 SNX25Q9H3E2 840 aa14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 PRDM6Q9NQX0 595 aa14.96□□□□□ -0.01
PKNOX1-209ENST00000560448 PRRG1O14668 218 aa14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 ADAM12O43184 909 aa14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 CLSTN1O94985 981 aa14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 AFPP02771 609 aaKnown RBP14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 EEF1GP26641 437 aaKnown RBP14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 TFF2Q03403 129 aa14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 C4orf50Q6ZRC1 276 aa14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 LEMD2Q8NC56 503 aa14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 OR10T2Q8NGX3 314 aa14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 KBTBD7Q8WVZ9 684 aa14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 TNIP3Q96KP6 325 aa14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 CNOT6LQ96LI5 555 aaKnown RBP14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 FAM81BQ96LP2 452 aa14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 RTP3Q9BQQ7 232 aa14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 BCO2Q9BYV7 579 aa14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 NXF1Q9UBU9 619 aaKnown RBP14.95□□□□□ -0.02
PKNOX1-209ENST00000560448 PRUNE2Q8WUY3 3088 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 CCDC195A0A1B0GUA6 201 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 GTPBP10A4D1E9 387 aaKnown RBP14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 LRG1P02750 347 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 TBXAS1P24557 533 aaPredicted RBP14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 GNL1P36915 607 aaPredicted RBP14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 ARPP19P56211 112 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 YWHAEP62258 255 aaKnown RBP14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 ADCY1Q08828 1119 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 KCNH2Q12809 1159 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 CFAP221Q4G0U5 840 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 CBWD6Q4V339 395 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 CBWD3Q5JTY5 395 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 CBWD5Q5RIA9 395 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 ELMOD1Q8N336 334 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 SLC7A14Q8TBB6 771 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 FAM84AQ96KN4 292 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 MED15Q96RN5 788 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 MMRN2Q9H8L6 949 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 CYP4F11Q9HBI6 524 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 NFE2L3Q9Y4A8 694 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 USP15Q9Y4E8 981 aaPredicted RBP14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 ASB3Q9Y575 518 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 REV3LO60673 3130 aa14.94□□□□□ -0.02
PKNOX1-209ENST00000560448 MTMR11A4FU01 709 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 BMP1P13497 986 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 ASPAP45381 313 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 RBM10P98175 930 aaKnown RBP14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 MYL5Q02045 173 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 INCA1Q0VD86 236 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 MAN2A1Q16706 1144 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 SLC39A12Q504Y0 691 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 RARS2Q5T160 578 aaKnown RBP14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 FAM171BQ6P995 826 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 SARM1Q6SZW1 724 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 RNF19BQ6ZMZ0 732 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 ANKRD20A12PQ8NF67 263 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 OR6B3Q8NGW1 331 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 SMG7Q92540 1137 aaKnown RBP14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 TRIM44Q96DX7 344 aaPredicted RBP14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 SYT15Q9BQS2 421 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 PHF7Q9BWX1 381 aaPredicted RBP14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 PIDD1Q9HB75 910 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 USTQ9Y2C2 406 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 PCDHB5Q9Y5E4 795 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 INSL5Q9Y5Q6 135 aa14.93□□□□□ -0.02
PKNOX1-209ENST00000560448 A8MXQ7 604 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 TPM2P07951 284 aa14.92□□□□□ -0.02
PKNOX1-209ENST00000560448 MTIF2P46199 727 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms