RNA–Protein interactions for RNA: ENST00000560029.5

CRNDE-208, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 659 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-208ENST00000560029 TRIM54Q9BYV2 358 aa6.09□□□□□ -1.43
CRNDE-208ENST00000560029 WDR11Q9BZH6 1224 aa6.09□□□□□ -1.43
CRNDE-208ENST00000560029 LRRC27Q9C0I9 530 aa6.09□□□□□ -1.43
CRNDE-208ENST00000560029 RNPEPQ9H4A4 650 aa6.09□□□□□ -1.43
CRNDE-208ENST00000560029 SPATA31A6Q5VVP1 1343 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 VPS4BO75351 444 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 DNAJB5O75953 348 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 UNC5CO95185 931 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 KIF20AO95235 890 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 ERBB2P04626 1255 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 SPATA31D3P0C874 917 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 SLC5A1P13866 664 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 PHKG2P15735 406 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 ARFIP2P53365 341 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 HABP2Q14520 560 aaPredicted RBP6.08□□□□□ -1.44
CRNDE-208ENST00000560029 CNGA2Q16280 664 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 SYCP2LQ5T4T6 812 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 SPATA31D4Q6ZUB0 917 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 CFAP52Q8N1V2 620 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 PARD3BQ8TEW8 1205 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 KBTBD7Q8WVZ9 684 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 NAA15Q9BXJ9 866 aaKnown RBP6.08□□□□□ -1.44
CRNDE-208ENST00000560029 SERHL2Q9H4I8 314 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 KIAA1586Q9HCI6 787 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 STK32BQ9NY57 414 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 MAP3K2Q9Y2U5 619 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 MED16Q9Y2X0 877 aa6.08□□□□□ -1.44
CRNDE-208ENST00000560029 ANO9A1A5B4 782 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 POLRMTO00411 1230 aaKnown RBP6.07□□□□□ -1.44
CRNDE-208ENST00000560029 BTN3A1O00481 513 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 NCR1O76036 304 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 GPANK1O95872 356 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 ELANEP08246 267 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 EN2P19622 333 aaPredicted RBP6.07□□□□□ -1.44
CRNDE-208ENST00000560029 PLA2G5P39877 138 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 KRTAP10-9P60411 292 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 FMO1Q01740 532 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 FBXO42Q6P3S6 717 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 SLC30A10Q6XR72 485 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 ZNF783Q6ZMS7 281 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 MAPKAPK5Q8IW41 473 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 FAM46DQ8NEK8 389 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 OR6B3Q8NGW1 331 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 CNPPD1Q9BV87 410 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 SLC46A2Q9BY10 475 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 NUP62CLQ9H1M0 184 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 ZNF287Q9HBT7 754 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 SACM1LQ9NTJ5 587 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 OGDHLQ9ULD0 1010 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 CORO2BQ9UQ03 480 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 MTO1Q9Y2Z2 717 aaKnown RBP6.07□□□□□ -1.44
CRNDE-208ENST00000560029 FPGT-TNNI3KV9GXZ4 949 aa6.07□□□□□ -1.44
CRNDE-208ENST00000560029 POLR2AP24928 1970 aaKnown RBP6.06□□□□□ -1.44
CRNDE-208ENST00000560029 KRTAP29-1A8MX34 341 aaPredicted RBP6.06□□□□□ -1.44
CRNDE-208ENST00000560029 RNASET2O00584 256 aaKnown RBP6.06□□□□□ -1.44
CRNDE-208ENST00000560029 ERN1O75460 977 aaKnown RBP6.06□□□□□ -1.44
CRNDE-208ENST00000560029 CHEK2O96017 543 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 GRPP07492 148 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 PIGFQ07326 219 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 ZNF844Q08AG5 666 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 PICALMQ13492 652 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 C3orf38Q5JPI3 329 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 PAPD7Q5XG87 772 aaKnown RBP6.06□□□□□ -1.44
CRNDE-208ENST00000560029 FOXR2Q6PJQ5 311 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 KRT78Q8N1N4 520 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 SUPT20HQ8NEM7 779 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 DDX17Q92841 729 aaKnown RBP6.06□□□□□ -1.44
CRNDE-208ENST00000560029 LRIG1Q96JA1 1093 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 TRIB1Q96RU8 372 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 TBCBQ99426 244 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 SMOQ99835 787 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 AKIP1Q9NQ31 210 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 SNX13Q9Y5W8 968 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 COX11Q9Y6N1 276 aa6.06□□□□□ -1.44
CRNDE-208ENST00000560029 RHPN2P1A8MT19 583 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 ISM1B1AKI9 464 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 TBC1D4O60343 1298 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 NDUFA10O95299 355 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 CFIP05156 583 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 PIM1P11309 404 aaPredicted RBP6.05□□□□□ -1.44
CRNDE-208ENST00000560029 ZKSCAN1P17029 563 aaPredicted RBP6.05□□□□□ -1.44
CRNDE-208ENST00000560029 CHRM3P20309 590 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 PIK3CBP42338 1070 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 UCP3P55916 312 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 SLC13A2Q13183 592 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 CTBP1Q13363 440 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 B3GNTL1Q67FW5 361 aaPredicted RBP6.05□□□□□ -1.44
CRNDE-208ENST00000560029 SP5Q6BEB4 398 aaPredicted RBP6.05□□□□□ -1.44
CRNDE-208ENST00000560029 TAPT1Q6NXT6 567 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 SESTD1Q86VW0 696 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 TMEM132CQ8N3T6 1108 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 LCORLQ8N3X6 602 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 MAML1Q92585 1016 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 PHKBQ93100 1093 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 RNF31Q96EP0 1072 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 MYEOVQ96EZ4 313 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 SUCLG2Q96I99 432 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 DPH1Q9BZG8 443 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 SIK2Q9H0K1 926 aa6.05□□□□□ -1.44
CRNDE-208ENST00000560029 SMURF2Q9HAU4 748 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms