RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 FECHP22830 423 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 HOXD11P31277 338 aaPredicted RBP11.11□□□□□ -0.63
TPM1-221ENST00000559831 CTNNB1P35222 781 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 PRKCIP41743 596 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 PSMC1P62191 440 aaKnown RBP11.11□□□□□ -0.63
TPM1-221ENST00000559831 CDK17Q00537 523 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 YWHAHQ04917 246 aaPredicted RBP11.11□□□□□ -0.63
TPM1-221ENST00000559831 MTF1Q14872 753 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 ZNF571Q7Z3V5 609 aaPredicted RBP11.11□□□□□ -0.63
TPM1-221ENST00000559831 VPS36Q86VN1 386 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 UNC93AQ86WB7 457 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 THEM5Q8N1Q8 247 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 EPS8L1Q8TE68 723 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 CCDC42Q96M95 316 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 AGPAT1Q99943 283 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 LPIN3Q9BQK8 851 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 SYT15Q9BQS2 421 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 PDCL3Q9H2J4 239 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 STXBP5LQ9Y2K9 1186 aa11.11□□□□□ -0.63
TPM1-221ENST00000559831 PTPRDP23468 1912 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 LINC01553A4QN01 128 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 CARNS1A5YM72 827 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 GABRDO14764 452 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 ATP2C2O75185 946 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 MMEP08473 750 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 FAM163BP0C2L3 166 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 VDRP11473 427 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 CHRNB2P17787 502 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 FGFR3P22607 806 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 CYLC1P35663 651 aaPredicted RBP11.1□□□□□ -0.63
TPM1-221ENST00000559831 PPM1AP35813 382 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 RGS19P49795 217 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 CDR1P51861 262 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 KIF11P52732 1056 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 CDR2Q01850 454 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 SGO2Q562F6 1265 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 VARS2Q5ST30 1063 aaKnown RBP11.1□□□□□ -0.63
TPM1-221ENST00000559831 RAD9BQ6WBX8 426 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.1□□□□□ -0.63
TPM1-221ENST00000559831 TAS1R1Q7RTX1 841 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 PASD1Q8IV76 773 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 C12orf29Q8N999 325 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 SPATA18Q8TC71 538 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 TFAP2BQ92481 460 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 TNIP3Q96KP6 325 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 RTP3Q9BQQ7 232 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 TTPALQ9BTX7 342 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 VN1R3Q9BXE9 311 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 FAM49BQ9NUQ9 324 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 SPTLC3Q9NUV7 552 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 NOCTQ9UK39 431 aaKnown RBP11.1□□□□□ -0.63
TPM1-221ENST00000559831 MTUS1Q9ULD2 1270 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 PDE4DIPQ5VU43 2346 aa11.1□□□□□ -0.63
TPM1-221ENST00000559831 SSU72P8A0A1W2PR75 194 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 ARHGAP6O43182 974 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 MED7O43513 233 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 FGF18O76093 207 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 CA3P07451 260 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 CCDC130P13994 396 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 PTPN1P18031 435 aaKnown RBP11.09□□□□□ -0.63
TPM1-221ENST00000559831 PCSK1P29120 753 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 ADORA2BP29275 332 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 CA8P35219 290 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 PBX2P40425 430 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 TSPY1Q01534 308 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 FMO1Q01740 532 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 KRT17Q04695 432 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 GFPT1Q06210 699 aaPredicted RBP11.09□□□□□ -0.63
TPM1-221ENST00000559831 CCDC142Q17RM4 750 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 GOLGA7BQ2TAP0 167 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 USP41Q3LFD5 358 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 CTXN3Q4LDR2 81 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 MDH1BQ5I0G3 518 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 RTP2Q5QGT7 225 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 KIAA0319Q5VV43 1072 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 ZNF280DQ6N043 979 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 KIAA1841Q6NSI8 718 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 PRSS55Q6UWB4 352 aaPredicted RBP11.09□□□□□ -0.63
TPM1-221ENST00000559831 ZNF677Q86XU0 584 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 GLYCTKQ8IVS8 523 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 CCDC170Q8IYT3 715 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 KLHL23Q8NBE8 558 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 B3GALNT2Q8NCR0 500 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 OR10T2Q8NGX3 314 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 LNX1Q8TBB1 728 aaPredicted RBP11.09□□□□□ -0.63
TPM1-221ENST00000559831 ZNF606Q8WXB4 792 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 RIN2Q8WYP3 895 aaPredicted RBP11.09□□□□□ -0.63
TPM1-221ENST00000559831 DDX1Q92499 740 aaKnown RBP11.09□□□□□ -0.63
TPM1-221ENST00000559831 CLP1Q92989 425 aaKnown RBP11.09□□□□□ -0.63
TPM1-221ENST00000559831 TMEM209Q96SK2 561 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 ZSWIM1Q9BR11 485 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 C17orf80Q9BSJ5 609 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 DESI2Q9BSY9 194 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 MED10Q9BTT4 135 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 HERC2P3Q9BVR0 1158 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 MSRAQ9UJ68 235 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 CDH9Q9ULB4 789 aa11.09□□□□□ -0.63
TPM1-221ENST00000559831 YBX2Q9Y2T7 364 aaKnown RBP11.09□□□□□ -0.63
TPM1-221ENST00000559831 RWDD3Q9Y3V2 267 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms