RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 TNNC1P63316 161 aa20.89■□□□□ 0.93
SHF-205ENST00000559566 DUSP4Q13115 394 aa20.89■□□□□ 0.93
SHF-205ENST00000559566 CCDC40Q4G0X9 1142 aa20.89■□□□□ 0.93
SHF-205ENST00000559566 INTS6LQ5JSJ4 861 aaKnown RBP20.89■□□□□ 0.93
SHF-205ENST00000559566 ATAT1Q5SQI0 421 aa20.89■□□□□ 0.93
SHF-205ENST00000559566 KRT39Q6A163 491 aa20.89■□□□□ 0.93
SHF-205ENST00000559566 ADHFE1Q8IWW8 467 aa20.89■□□□□ 0.93
SHF-205ENST00000559566 PHF7Q9BWX1 381 aaPredicted RBP20.89■□□□□ 0.93
SHF-205ENST00000559566 YIPF1Q9Y548 306 aa20.89■□□□□ 0.93
SHF-205ENST00000559566 MYBPHLA2RUH7 354 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 NRG2O14511 850 aaPredicted RBP20.88■□□□□ 0.93
SHF-205ENST00000559566 PRRG1O14668 218 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 TACC1O75410 805 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 HNRNPA1P09651 372 aaKnown RBP eCLIP20.88■□□□□ 0.93
SHF-205ENST00000559566 HOXA9P31269 272 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 MTHFRP42898 656 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 ASPAP45381 313 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 SGSM1Q2NKQ1 1148 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 UVSSAQ2YD98 709 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 ZNF667Q5HYK9 610 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 CCDC149Q6ZUS6 474 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 TRIM59Q8IWR1 403 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 SPATA18Q8TC71 538 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 RIPOR3Q96MK2 946 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 ACBD6Q9BR61 282 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 RHOBTB2Q9BYZ6 727 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 DPEP3Q9H4B8 488 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 METTL14Q9HCE5 456 aaKnown RBP20.88■□□□□ 0.93
SHF-205ENST00000559566 CRTAC1Q9NQ79 661 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 DNMT3BQ9UBC3 853 aaKnown RBP20.88■□□□□ 0.93
SHF-205ENST00000559566 FAM50BQ9Y247 325 aa20.88■□□□□ 0.93
SHF-205ENST00000559566 C19orf67A6NJJ6 358 aa20.87■□□□□ 0.93
SHF-205ENST00000559566 N4BP1O75113 896 aaKnown RBP20.87■□□□□ 0.93
SHF-205ENST00000559566 PDGFRBP09619 1106 aa20.87■□□□□ 0.93
SHF-205ENST00000559566 ELF1P32519 619 aa20.87■□□□□ 0.93
SHF-205ENST00000559566 LHX1P48742 406 aa20.87■□□□□ 0.93
SHF-205ENST00000559566 MARSP56192 900 aaKnown RBP20.87■□□□□ 0.93
SHF-205ENST00000559566 NOP14P78316 857 aaKnown RBP20.87■□□□□ 0.93
SHF-205ENST00000559566 MYL7Q01449 175 aa20.87■□□□□ 0.93
SHF-205ENST00000559566 TWF1Q12792 350 aa20.87■□□□□ 0.93
SHF-205ENST00000559566 CAVIN1Q6NZI2 390 aaKnown RBP20.87■□□□□ 0.93
SHF-205ENST00000559566 ELMSAN1Q6PJG2 1045 aa20.87■□□□□ 0.93
SHF-205ENST00000559566 C11orf57Q6ZUT1 292 aaPredicted RBP20.87■□□□□ 0.93
SHF-205ENST00000559566 GRASPQ7Z6J2 395 aaPredicted RBP20.87■□□□□ 0.93
SHF-205ENST00000559566 RPGRIP1Q96KN7 1286 aa20.87■□□□□ 0.93
SHF-205ENST00000559566 DNAJC25Q9H1X3 360 aa20.87■□□□□ 0.93
SHF-205ENST00000559566 WDR6Q9NNW5 1121 aaKnown RBP20.87■□□□□ 0.93
SHF-205ENST00000559566 HMGXB4Q9UGU5 601 aa20.87■□□□□ 0.93
SHF-205ENST00000559566 GTF3C4Q9UKN8 822 aa20.87■□□□□ 0.93
SHF-205ENST00000559566 CLSTN1O94985 981 aa20.86■□□□□ 0.93
SHF-205ENST00000559566 FAM171BQ6P995 826 aa20.86■□□□□ 0.93
SHF-205ENST00000559566 OR6B3Q8NGW1 331 aa20.86■□□□□ 0.93
SHF-205ENST00000559566 TAF4BQ92750 862 aa20.86■□□□□ 0.93
SHF-205ENST00000559566 CNOT6LQ96LI5 555 aaKnown RBP20.86■□□□□ 0.93
SHF-205ENST00000559566 NECTIN4Q96NY8 510 aa20.86■□□□□ 0.93
SHF-205ENST00000559566 SYT15Q9BQS2 421 aa20.86■□□□□ 0.93
SHF-205ENST00000559566 PIDD1Q9HB75 910 aa20.86■□□□□ 0.93
SHF-205ENST00000559566 RAB20Q9NX57 234 aa20.86■□□□□ 0.93
SHF-205ENST00000559566 ABI2Q9NYB9 513 aaPredicted RBP20.86■□□□□ 0.93
SHF-205ENST00000559566 CEP72Q9P209 647 aa20.86■□□□□ 0.93
SHF-205ENST00000559566 PRKAG3Q9UGI9 489 aa20.86■□□□□ 0.93
SHF-205ENST00000559566 COQ4Q9Y3A0 265 aa20.86■□□□□ 0.93
SHF-205ENST00000559566 C2orf16Q68DN1 1984 aa20.86■□□□□ 0.93
SHF-205ENST00000559566 MTCL1Q9Y4B5 1905 aaKnown RBP20.86■□□□□ 0.93
SHF-205ENST00000559566 CLUHO75153 1309 aa20.85■□□□□ 0.93
SHF-205ENST00000559566 C2CD4DB7Z1M9 353 aa20.85■□□□□ 0.93
SHF-205ENST00000559566 LOC730098B7Z3J9 87 aa20.85■□□□□ 0.93
SHF-205ENST00000559566 POU2F2P09086 479 aa20.85■□□□□ 0.93
SHF-205ENST00000559566 ERCC5P28715 1186 aaPredicted RBP20.85■□□□□ 0.93
SHF-205ENST00000559566 GNL1P36915 607 aaPredicted RBP20.85■□□□□ 0.93
SHF-205ENST00000559566 FMO5P49326 533 aa20.85■□□□□ 0.93
SHF-205ENST00000559566 GPR15P49685 360 aa20.85■□□□□ 0.93
SHF-205ENST00000559566 TSPY1Q01534 308 aa20.85■□□□□ 0.93
SHF-205ENST00000559566 ORC1Q13415 861 aa20.85■□□□□ 0.93
SHF-205ENST00000559566 POTEHQ6S545 545 aa20.85■□□□□ 0.93
SHF-205ENST00000559566 CYP26C1Q6V0L0 522 aa20.85■□□□□ 0.93
SHF-205ENST00000559566 DCP1BQ8IZD4 617 aaKnown RBP20.85■□□□□ 0.93
SHF-205ENST00000559566 FBXL13Q8NEE6 735 aa20.85■□□□□ 0.93
SHF-205ENST00000559566 KHSRPQ92945 711 aaKnown RBP eCLIP20.85■□□□□ 0.93
SHF-205ENST00000559566 TATDN2Q93075 761 aa20.85■□□□□ 0.93
SHF-205ENST00000559566 BCO2Q9BYV7 579 aa20.85■□□□□ 0.93
SHF-205ENST00000559566 MAFFQ9ULX9 164 aa20.85■□□□□ 0.93
SHF-205ENST00000559566 STX10O60499 249 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 LRG1P02750 347 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 FAM163BP0C2L3 166 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 ATF6P18850 670 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 PCSK1P29120 753 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 HSP90AA4PQ58FG1 418 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 RTL10Q7L3V2 364 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 HS6ST3Q8IZP7 471 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 GJD3Q8N144 294 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 STKLD1Q8NE28 680 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 MYLPFQ96A32 169 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 TWNKQ96RR1 684 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 ARID3AQ99856 593 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 NIF3L1Q9GZT8 377 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 SNX25Q9H3E2 840 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 CDH9Q9ULB4 789 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 DENND4AQ7Z401 1863 aa20.84■□□□□ 0.93
SHF-205ENST00000559566 GNA14O95837 355 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms