RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 TMEM86AQ8N2M4 240 aa20.05■□□□□ 0.8
CASC4-209ENST00000559222 SLC35C1Q96A29 364 aa20.05■□□□□ 0.8
CASC4-209ENST00000559222 SYAP1Q96A49 352 aaPredicted RBP20.05■□□□□ 0.8
CASC4-209ENST00000559222 CEP63Q96MT8 703 aa20.05■□□□□ 0.8
CASC4-209ENST00000559222 RHOBTB2Q9BYZ6 727 aa20.05■□□□□ 0.8
CASC4-209ENST00000559222 DPEP3Q9H4B8 488 aa20.05■□□□□ 0.8
CASC4-209ENST00000559222 PIDD1Q9HB75 910 aa20.05■□□□□ 0.8
CASC4-209ENST00000559222 TMEM8AQ9HCN3 771 aa20.05■□□□□ 0.8
CASC4-209ENST00000559222 PRKAG3Q9UGI9 489 aa20.05■□□□□ 0.8
CASC4-209ENST00000559222 DPP7Q9UHL4 492 aa20.05■□□□□ 0.8
CASC4-209ENST00000559222 BICDL2A1A5D9 508 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 CLSTN1O94985 981 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 ASS1P00966 412 aaKnown RBP20.04■□□□□ 0.8
CASC4-209ENST00000559222 PDGFRBP09619 1106 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 HNRNPA1P09651 372 aaKnown RBP eCLIP20.04■□□□□ 0.8
CASC4-209ENST00000559222 WARSP23381 471 aaKnown RBP20.04■□□□□ 0.8
CASC4-209ENST00000559222 HOXA9P31269 272 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 ATICP31939 592 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 ELF1P32519 619 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 NLRP12P59046 1061 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 TNNC1P63316 161 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 ENPEPQ07075 957 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 TWF1Q12792 350 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 INTS6LQ5JSJ4 861 aaKnown RBP20.04■□□□□ 0.8
CASC4-209ENST00000559222 ELMSAN1Q6PJG2 1045 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 CCDC149Q6ZUS6 474 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 FILIP1Q7Z7B0 1213 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 GJD3Q8N144 294 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 STKLD1Q8NE28 680 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 SRRTQ9BXP5 876 aaKnown RBP20.04■□□□□ 0.8
CASC4-209ENST00000559222 OXCT2Q9BYC2 517 aaPredicted RBP20.04■□□□□ 0.8
CASC4-209ENST00000559222 DNAJC25Q9H1X3 360 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 VRTNQ9H8Y1 702 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 CRTAC1Q9NQ79 661 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 TMEM63CQ9P1W3 806 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 CEP72Q9P209 647 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 DNMT3BQ9UBC3 853 aaKnown RBP20.04■□□□□ 0.8
CASC4-209ENST00000559222 RWDD2AQ9UIY3 292 aa20.04■□□□□ 0.8
CASC4-209ENST00000559222 MYBPHLA2RUH7 354 aa20.03■□□□□ 0.8
CASC4-209ENST00000559222 SSTR3P32745 418 aaPredicted RBP20.03■□□□□ 0.8
CASC4-209ENST00000559222 GPR15P49685 360 aa20.03■□□□□ 0.8
CASC4-209ENST00000559222 MXI1P50539 228 aa20.03■□□□□ 0.8
CASC4-209ENST00000559222 UVSSAQ2YD98 709 aa20.03■□□□□ 0.8
CASC4-209ENST00000559222 CCDC40Q4G0X9 1142 aa20.03■□□□□ 0.8
CASC4-209ENST00000559222 ZNF667Q5HYK9 610 aa20.03■□□□□ 0.8
CASC4-209ENST00000559222 FOXR2Q6PJQ5 311 aa20.03■□□□□ 0.8
CASC4-209ENST00000559222 POTEHQ6S545 545 aa20.03■□□□□ 0.8
CASC4-209ENST00000559222 HS6ST3Q8IZP7 471 aa20.03■□□□□ 0.8
CASC4-209ENST00000559222 NECTIN4Q96NY8 510 aa20.03■□□□□ 0.8
CASC4-209ENST00000559222 SYT15Q9BQS2 421 aa20.03■□□□□ 0.8
CASC4-209ENST00000559222 WDR6Q9NNW5 1121 aaKnown RBP20.03■□□□□ 0.8
CASC4-209ENST00000559222 ABI2Q9NYB9 513 aaPredicted RBP20.03■□□□□ 0.8
CASC4-209ENST00000559222 HMGXB4Q9UGU5 601 aa20.03■□□□□ 0.8
CASC4-209ENST00000559222 ARMCX3Q9UH62 379 aaPredicted RBP20.03■□□□□ 0.8
CASC4-209ENST00000559222 GTF3C4Q9UKN8 822 aa20.03■□□□□ 0.8
CASC4-209ENST00000559222 ASPAP45381 313 aa20.02■□□□□ 0.8
CASC4-209ENST00000559222 NOP14P78316 857 aaKnown RBP20.02■□□□□ 0.8
CASC4-209ENST00000559222 MYL7Q01449 175 aa20.02■□□□□ 0.8
CASC4-209ENST00000559222 ORC1Q13415 861 aa20.02■□□□□ 0.8
CASC4-209ENST00000559222 SLC5A9Q2M3M2 681 aa20.02■□□□□ 0.8
CASC4-209ENST00000559222 KRT39Q6A163 491 aa20.02■□□□□ 0.8
CASC4-209ENST00000559222 GET4Q7L5D6 327 aaPredicted RBP20.02■□□□□ 0.8
CASC4-209ENST00000559222 DPH6Q7L8W6 267 aa20.02■□□□□ 0.8
CASC4-209ENST00000559222 IRF2BP1Q8IU81 584 aa20.02■□□□□ 0.8
CASC4-209ENST00000559222 MLKLQ8NB16 471 aa20.02■□□□□ 0.8
CASC4-209ENST00000559222 ST13P5Q8NFI4 369 aaPredicted RBP20.02■□□□□ 0.8
CASC4-209ENST00000559222 ITFG1Q8TB96 612 aa20.02■□□□□ 0.8
CASC4-209ENST00000559222 MYADMQ96S97 322 aa20.02■□□□□ 0.8
CASC4-209ENST00000559222 ACBD6Q9BR61 282 aa20.02■□□□□ 0.8
CASC4-209ENST00000559222 OBSL1O75147 1896 aa20.02■□□□□ 0.8
CASC4-209ENST00000559222 TACC1O75410 805 aa20.01■□□□□ 0.79
CASC4-209ENST00000559222 MBD3O95983 291 aa20.01■□□□□ 0.79
CASC4-209ENST00000559222 LRG1P02750 347 aa20.01■□□□□ 0.79
CASC4-209ENST00000559222 ATF6P18850 670 aa20.01■□□□□ 0.79
CASC4-209ENST00000559222 GTF2H1P32780 548 aa20.01■□□□□ 0.79
CASC4-209ENST00000559222 CCR2P41597 374 aa20.01■□□□□ 0.79
CASC4-209ENST00000559222 LHX1P48742 406 aa20.01■□□□□ 0.79
CASC4-209ENST00000559222 TSPY1Q01534 308 aa20.01■□□□□ 0.79
CASC4-209ENST00000559222 SGSM1Q2NKQ1 1148 aa20.01■□□□□ 0.79
CASC4-209ENST00000559222 SDHAF4Q5VUM1 108 aa20.01■□□□□ 0.79
CASC4-209ENST00000559222 FRMD5Q7Z6J6 570 aa20.01■□□□□ 0.79
CASC4-209ENST00000559222 OR6B3Q8NGW1 331 aa20.01■□□□□ 0.79
CASC4-209ENST00000559222 SEPT5Q99719 369 aaPredicted RBP20.01■□□□□ 0.79
CASC4-209ENST00000559222 GREB1Q4ZG55 1949 aa20.01■□□□□ 0.79
CASC4-209ENST00000559222 TTC28Q96AY4 2481 aa20.01■□□□□ 0.79
CASC4-209ENST00000559222 XYLBO75191 536 aa20■□□□□ 0.79
CASC4-209ENST00000559222 POU2F2P09086 479 aa20■□□□□ 0.79
CASC4-209ENST00000559222 C11orf57Q6ZUT1 292 aaPredicted RBP20■□□□□ 0.79
CASC4-209ENST00000559222 TRIM59Q8IWR1 403 aa20■□□□□ 0.79
CASC4-209ENST00000559222 DCP1BQ8IZD4 617 aaKnown RBP20■□□□□ 0.79
CASC4-209ENST00000559222 SPATA18Q8TC71 538 aa20■□□□□ 0.79
CASC4-209ENST00000559222 GPR152Q8TDT2 470 aa20■□□□□ 0.79
CASC4-209ENST00000559222 ING5Q8WYH8 240 aa20■□□□□ 0.79
CASC4-209ENST00000559222 MYLPFQ96A32 169 aa20■□□□□ 0.79
CASC4-209ENST00000559222 TCEAL4Q96EI5 215 aa20■□□□□ 0.79
CASC4-209ENST00000559222 ARID3AQ99856 593 aa20■□□□□ 0.79
CASC4-209ENST00000559222 CORO1BQ9BR76 489 aa20■□□□□ 0.79
CASC4-209ENST00000559222 SNX25Q9H3E2 840 aa20■□□□□ 0.79
CASC4-209ENST00000559222 RHOP08100 348 aa19.99■□□□□ 0.79
CASC4-209ENST00000559222 HAPLN1P10915 354 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms