RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 MROH9Q5TGP6 573 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 TTC39BQ5VTQ0 682 aaPredicted RBP7.45□□□□□ -1.22
USP3-210ENST00000559192 TRIM72Q6ZMU5 477 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 FAM160B2Q86V87 743 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 E2F7Q96AV8 911 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 RMI1Q9H9A7 625 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 A1CFQ9NQ94 594 aaKnown RBP7.45□□□□□ -1.22
USP3-210ENST00000559192 RAB6BQ9NRW1 208 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 NRBP2Q9NSY0 501 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 TBC1D23Q9NUY8 699 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 ADA2Q9NZK5 511 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 ZC3H7BQ9UGR2 993 aaKnown RBP7.45□□□□□ -1.22
USP3-210ENST00000559192 TOPAZ1Q8N9V7 1692 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 TCRBV7S2A1N4TA0A589 114 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 GTPBP10A4D1E9 387 aaKnown RBP7.45□□□□□ -1.22
USP3-210ENST00000559192 TRIM49D1C9J1S8 452 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 EML1O00423 815 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 PSTPIP1O43586 416 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 CST8O60676 142 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 APRTP07741 180 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 GSTA2P09210 222 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 VCAM1P19320 739 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 GSCP56915 257 aaPredicted RBP7.45□□□□□ -1.22
USP3-210ENST00000559192 TFDP1Q14186 410 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 SEZ6Q53EL9 994 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 COBLL1Q53SF7 1204 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 FAM102AQ5T9C2 384 aaPredicted RBP7.45□□□□□ -1.22
USP3-210ENST00000559192 LRRC57Q8N9N7 239 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 FEZF2Q8TBJ5 459 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 TAS1R2Q8TE23 839 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 CASP10Q92851 521 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 SLC38A10Q9HBR0 1119 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 LRRC4BQ9NT99 713 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 ASNSD1Q9NWL6 643 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 COG5Q9UP83 839 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 NALCNQ8IZF0 1738 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 RGPD2P0DJD1 1756 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 LGR5O75473 907 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 RAD17O75943 681 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 PYGBP11216 843 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 TCN1P20061 433 aaPredicted RBP7.45□□□□□ -1.22
USP3-210ENST00000559192 GTF2H1P32780 548 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 SLC34A1Q06495 639 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 ZCWPW2Q504Y3 356 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 TCP10LQ8TDR4 215 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 ZNF75CPQ92670 426 aaPredicted RBP7.45□□□□□ -1.22
USP3-210ENST00000559192 TBC1D10AQ9BXI6 508 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 SLCO1B3Q9NPD5 702 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 TBC1D22BQ9NU19 505 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 PCYOX1Q9UHG3 505 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 USP21Q9UK80 565 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 TLK1Q9UKI8 766 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 KRT36O76013 467 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 MAP3K6O95382 1288 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 ADRA1DP25100 572 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 SOX10P56693 466 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 PPATQ06203 517 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 DMPKQ09013 629 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 FLOT2Q14254 428 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 RNF43Q68DV7 783 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 SLFN12LQ6IEE8 588 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 CCDC33Q8N5R6 958 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 LRRC15Q8TF66 581 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 TMEM143Q96AN5 459 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 CLMNQ96JQ2 1002 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 NLRP4Q96MN2 994 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 DIABLOQ9NR28 239 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 KCND2Q9NZV8 630 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 STRIP2Q9ULQ0 834 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 ATP11BQ9Y2G3 1177 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 PCDHB2Q9Y5E7 798 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 ARFGEF2Q9Y6D5 1785 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 P4HA2O15460 535 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 ECE2O60344 883 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 SEC24DO94855 1032 aaPredicted RBP7.44□□□□□ -1.22
USP3-210ENST00000559192 PECAM1P16284 738 aaPredicted RBP7.44□□□□□ -1.22
USP3-210ENST00000559192 AQP5P55064 265 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 PTK6Q13882 451 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 CYLC2Q14093 348 aaPredicted RBP7.44□□□□□ -1.22
USP3-210ENST00000559192 LRRC6Q86X45 466 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 ARL10Q8N8L6 244 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 GABPB2Q8TAK5 448 aaPredicted RBP7.44□□□□□ -1.22
USP3-210ENST00000559192 FAM149B1Q96BN6 582 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 ALKBH8Q96BT7 664 aaKnown RBP7.44□□□□□ -1.22
USP3-210ENST00000559192 THAP11Q96EK4 314 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 TMEM150BA6NC51 233 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 AIM2O14862 343 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 ADCY3O60266 1144 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 YY1P25490 414 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 GPC3P51654 580 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 ORC1Q13415 861 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 RARS2Q5T160 578 aaKnown RBP7.44□□□□□ -1.22
USP3-210ENST00000559192 TRAF7Q6Q0C0 670 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 FITM2Q8N6M3 262 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 MAGEC3Q8TD91 643 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 TLCD1Q96CP7 247 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 HDAC11Q96DB2 347 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 OMA1Q96E52 524 aa7.44□□□□□ -1.22
USP3-210ENST00000559192 ASCC2Q9H1I8 757 aaPredicted RBP7.44□□□□□ -1.22
USP3-210ENST00000559192 CYP26B1Q9NR63 512 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms