RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 GNL1P36915 607 aaPredicted RBP13.28□□□□□ -0.28
GABPB1-208ENST00000558970 USP8P40818 1118 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 NDST1P52848 882 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 RAPGEF1Q13905 1077 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 SLC39A12Q504Y0 691 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 TCEAL5Q5H9L2 206 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 TMEM86AQ8N2M4 240 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 MRPL43Q8N983 215 aaKnown RBP13.28□□□□□ -0.28
GABPB1-208ENST00000558970 KLHL5Q96PQ7 755 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 TWNKQ96RR1 684 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 SYT15Q9BQS2 421 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 CLSTN3Q9BQT9 956 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 EMILIN2Q9BXX0 1053 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 BCO2Q9BYV7 579 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 NSUN3Q9H649 340 aaKnown RBP13.28□□□□□ -0.28
GABPB1-208ENST00000558970 TLE6Q9H808 572 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 NLRC4Q9NPP4 1024 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 MTRRQ9UBK8 725 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 STK39Q9UEW8 545 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 DNAJC12Q9UKB3 198 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 PCDHB4Q9Y5E5 795 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 FHOD1Q9Y613 1164 aa13.28□□□□□ -0.28
GABPB1-208ENST00000558970 PRRC2BQ5JSZ5 2229 aaKnown RBP13.27□□□□□ -0.28
GABPB1-208ENST00000558970 LRRC10BA6NIK2 292 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 SPDYE4A6NLX3 237 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 AP5Z1O43299 807 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 LILRB3O75022 631 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 ADH1AP07327 375 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 KRT5P13647 590 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 WARSP23381 471 aaKnown RBP13.27□□□□□ -0.29
GABPB1-208ENST00000558970 PAX3P23760 479 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 LHX1P48742 406 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 NDUFV1P49821 464 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 ROR1Q01973 937 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 IQCEQ6IPM2 695 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 PDXDC1Q6P996 788 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 ACOT1Q86TX2 421 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 NEK11Q8NG66 645 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 KREMEN1Q96MU8 473 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 RHOBTB2Q9BYZ6 727 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 TRIM5Q9C035 493 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 CISHQ9NSE2 258 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 FAM49BQ9NUQ9 324 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 SSX2IPQ9Y2D8 614 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 SIK3Q9Y2K2 1263 aa13.27□□□□□ -0.29
GABPB1-208ENST00000558970 WDR27A2RRH5 827 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 GABRDO14764 452 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 LINC01565O15544 149 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 CLASP2O75122 1294 aaKnown RBP13.26□□□□□ -0.29
GABPB1-208ENST00000558970 NCOR1O75376 2440 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 TACC1O75410 805 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 OAZ2O95190 189 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 EPCAMP16422 314 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 TBXAS1P24557 533 aaPredicted RBP13.26□□□□□ -0.29
GABPB1-208ENST00000558970 MFAP3P55082 362 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 POLR2FP61218 127 aaKnown RBP13.26□□□□□ -0.29
GABPB1-208ENST00000558970 TSPY1Q01534 308 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 CYP27A1Q02318 531 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 CREMQ03060 361 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 MRPL58Q14197 206 aaKnown RBP13.26□□□□□ -0.29
GABPB1-208ENST00000558970 NR1I3Q14994 352 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 SKIV2LQ15477 1246 aaKnown RBP13.26□□□□□ -0.29
GABPB1-208ENST00000558970 MDH1BQ5I0G3 518 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 KLHDC7AQ5VTJ3 777 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 PDE12Q6L8Q7 609 aaKnown RBP13.26□□□□□ -0.29
GABPB1-208ENST00000558970 TMEM270Q6UE05 265 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 RNF19BQ6ZMZ0 732 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 LIMS2Q7Z4I7 341 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 ELOVL4Q9GZR5 314 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 CYP3A43Q9HB55 503 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 CRTAC1Q9NQ79 661 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.26□□□□□ -0.29
GABPB1-208ENST00000558970 TMLHEQ9NVH6 421 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 ABI2Q9NYB9 513 aaPredicted RBP13.26□□□□□ -0.29
GABPB1-208ENST00000558970 GTF3C4Q9UKN8 822 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 MYO16Q9Y6X6 1858 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 MUC3AQ02505 3323 aa13.26□□□□□ -0.29
GABPB1-208ENST00000558970 C2orf16Q68DN1 1984 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 MYBPHLA2RUH7 354 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 OR6C75A6NL08 312 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 CBFA2T2O43439 604 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 TGM5O43548 720 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 CILPO75339 1184 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 GLUD1P00367 558 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 TPM3P06753 285 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 CCDC130P13994 396 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 UCHL3P15374 230 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 TRIM21P19474 475 aaKnown RBP13.25□□□□□ -0.29
GABPB1-208ENST00000558970 PCSK1P29120 753 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 SSTR3P32745 418 aaPredicted RBP13.25□□□□□ -0.29
GABPB1-208ENST00000558970 YWHAEP62258 255 aaKnown RBP13.25□□□□□ -0.29
GABPB1-208ENST00000558970 GCNT1Q02742 428 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 HYAL1Q12794 435 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 INTS6LQ5JSJ4 861 aaKnown RBP13.25□□□□□ -0.29
GABPB1-208ENST00000558970 TJAP1Q5JTD0 557 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 LRRTM3Q86VH5 581 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 C12orf29Q8N999 325 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 B3GALNT2Q8NCR0 500 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 WHAMMQ8TF30 809 aa13.25□□□□□ -0.29
GABPB1-208ENST00000558970 PPP2R3CQ969Q6 453 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms