RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CCDC170Q8IYT3 715 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 RNF168Q8IYW5 571 aaPredicted RBP19.25■□□□□ 0.67
CLPX-203ENST00000558958 HEXIM2Q96MH2 286 aaKnown RBP19.25■□□□□ 0.67
CLPX-203ENST00000558958 AGPAT1Q99943 283 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 RTP3Q9BQQ7 232 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 VN1R3Q9BXE9 311 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 DPEP3Q9H4B8 488 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 DDX43Q9NXZ2 648 aaKnown RBP19.25■□□□□ 0.67
CLPX-203ENST00000558958 KIAA1257Q9ULG3 409 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 PCDHB12Q9Y5F1 795 aa19.25■□□□□ 0.67
CLPX-203ENST00000558958 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.25■□□□□ 0.67
CLPX-203ENST00000558958 OAZ2O95190 189 aa19.24■□□□□ 0.67
CLPX-203ENST00000558958 CHRNB2P17787 502 aa19.24■□□□□ 0.67
CLPX-203ENST00000558958 CDR2Q01850 454 aa19.24■□□□□ 0.67
CLPX-203ENST00000558958 YWHAHQ04917 246 aaPredicted RBP19.24■□□□□ 0.67
CLPX-203ENST00000558958 MTF1Q14872 753 aa19.24■□□□□ 0.67
CLPX-203ENST00000558958 TAF3Q5VWG9 929 aa19.24■□□□□ 0.67
CLPX-203ENST00000558958 ZNF606Q8WXB4 792 aa19.24■□□□□ 0.67
CLPX-203ENST00000558958 TFAP2BQ92481 460 aa19.24■□□□□ 0.67
CLPX-203ENST00000558958 TMEM169Q96HH4 297 aa19.24■□□□□ 0.67
CLPX-203ENST00000558958 TNIP3Q96KP6 325 aa19.24■□□□□ 0.67
CLPX-203ENST00000558958 ZSWIM1Q9BR11 485 aa19.24■□□□□ 0.67
CLPX-203ENST00000558958 DNAI2Q9GZS0 605 aa19.24■□□□□ 0.67
CLPX-203ENST00000558958 DEF6Q9H4E7 631 aa19.24■□□□□ 0.67
CLPX-203ENST00000558958 PUF60Q9UHX1 559 aaKnown RBP19.24■□□□□ 0.67
CLPX-203ENST00000558958 TSC2P49815 1807 aa19.24■□□□□ 0.67
CLPX-203ENST00000558958 RANBP2P49792 3224 aaKnown RBP19.23■□□□□ 0.67
CLPX-203ENST00000558958 THAP12O43422 761 aa19.23■□□□□ 0.67
CLPX-203ENST00000558958 MMEP08473 750 aa19.23■□□□□ 0.67
CLPX-203ENST00000558958 VDRP11473 427 aa19.23■□□□□ 0.67
CLPX-203ENST00000558958 CD19P15391 556 aa19.23■□□□□ 0.67
CLPX-203ENST00000558958 ACAT1P24752 427 aaKnown RBP19.23■□□□□ 0.67
CLPX-203ENST00000558958 BRD2P25440 801 aaKnown RBP19.23■□□□□ 0.67
CLPX-203ENST00000558958 PCSK1P29120 753 aa19.23■□□□□ 0.67
CLPX-203ENST00000558958 BMP8BP34820 402 aa19.23■□□□□ 0.67
CLPX-203ENST00000558958 KIF11P52732 1056 aa19.23■□□□□ 0.67
CLPX-203ENST00000558958 FMO1Q01740 532 aa19.23■□□□□ 0.67
CLPX-203ENST00000558958 MRPL58Q14197 206 aaKnown RBP19.23■□□□□ 0.67
CLPX-203ENST00000558958 BMS1Q14692 1282 aaKnown RBP19.23■□□□□ 0.67
CLPX-203ENST00000558958 TAS1R1Q7RTX1 841 aa19.23■□□□□ 0.67
CLPX-203ENST00000558958 VPS36Q86VN1 386 aa19.23■□□□□ 0.67
CLPX-203ENST00000558958 ACBD6Q9BR61 282 aa19.23■□□□□ 0.67
CLPX-203ENST00000558958 ADAMTS1Q9UHI8 967 aa19.23■□□□□ 0.67
CLPX-203ENST00000558958 EPN1Q9Y6I3 576 aaPredicted RBP19.23■□□□□ 0.67
CLPX-203ENST00000558958 LINC01553A4QN01 128 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 DDX3XO00571 662 aaKnown RBP eCLIP19.22■□□□□ 0.674e-20■■■□□ 17.4
CLPX-203ENST00000558958 AKR1B10O60218 316 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 MYOGP15173 224 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 PTPN1P18031 435 aaKnown RBP19.22■□□□□ 0.67
CLPX-203ENST00000558958 TNFAIP3P21580 790 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 CYLC1P35663 651 aaPredicted RBP19.22■□□□□ 0.67
CLPX-203ENST00000558958 USP41Q3LFD5 358 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 SGO2Q562F6 1265 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 VARS2Q5ST30 1063 aaKnown RBP19.22■□□□□ 0.67
CLPX-203ENST00000558958 KIAA0319Q5VV43 1072 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 DDX53Q86TM3 631 aaKnown RBP19.22■□□□□ 0.67
CLPX-203ENST00000558958 CEP57Q86XR8 500 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 GLYCTKQ8IVS8 523 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 THEM5Q8N1Q8 247 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 C12orf29Q8N999 325 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 B3GALNT2Q8NCR0 500 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 SLC30A5Q8TAD4 765 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 LNX1Q8TBB1 728 aaPredicted RBP19.22■□□□□ 0.67
CLPX-203ENST00000558958 B3GALT6Q96L58 329 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 TTPALQ9BTX7 342 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.22■□□□□ 0.67
CLPX-203ENST00000558958 CDH9Q9ULB4 789 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 PCDHA11Q9Y5I1 949 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 KIAA1671Q9BY89 1806 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 A0A087X0T9 212 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 MED7O43513 233 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 ATP2C2O75185 946 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 NDUFA10O95299 355 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 SOD2P04179 222 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 FAM228BP0C875 321 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 BMPR1AP36894 532 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 PSMC1P62191 440 aaKnown RBP19.22■□□□□ 0.67
CLPX-203ENST00000558958 SLC18A3Q16572 532 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 RTP2Q5QGT7 225 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 PCDHB18PQ96TA0 734 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 LPIN3Q9BQK8 851 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 SYT15Q9BQS2 421 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 CRTAC1Q9NQ79 661 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 CHST7Q9NS84 486 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 SPTLC3Q9NUV7 552 aa19.22■□□□□ 0.67
CLPX-203ENST00000558958 VWA8A3KMH1 1905 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 EIF3CLB5ME19 914 aaKnown RBP19.21■□□□□ 0.67
CLPX-203ENST00000558958 O00370 1275 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 FGF18O76093 207 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 LCA5LO95447 670 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 CFHP08603 1231 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 PLCB3Q01970 1234 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 GFPT1Q06210 699 aaPredicted RBP19.21■□□□□ 0.67
CLPX-203ENST00000558958 CNGA2Q16280 664 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 ARHGAP17Q68EM7 881 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 PALB2Q86YC2 1186 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 OR10T2Q8NGX3 314 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 EIF3CQ99613 913 aaKnown RBP19.21■□□□□ 0.67
CLPX-203ENST00000558958 HERC2P3Q9BVR0 1158 aa19.21■□□□□ 0.67
CLPX-203ENST00000558958 SEPT11Q9NVA2 429 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms