RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 AGO2Q9UKV8 859 aaKnown RBP8.72□□□□□ -1.01
TRAF3-205ENST00000558700 DSEQ9UL01 958 aa8.72□□□□□ -1.01
TRAF3-205ENST00000558700 DOLKQ9UPQ8 538 aa8.72□□□□□ -1.01
TRAF3-205ENST00000558700 TIMM13Q9Y5L4 95 aaPredicted RBP8.72□□□□□ -1.01
TRAF3-205ENST00000558700 SCN1AP35498 2009 aa8.71□□□□□ -1.01
TRAF3-205ENST00000558700 MTMR11A4FU01 709 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 TISP43B9A030 160 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 K7ELQ4 463 aaPredicted RBP8.71□□□□□ -1.02
TRAF3-205ENST00000558700 PPEF2O14830 753 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 NCAM2O15394 837 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 GCNT3O95395 438 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 FGF19O95750 216 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 CYP11A1P05108 521 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 OR4Q2P0C623 313 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 MYL4P12829 197 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 FCARP24071 287 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 PNPLA4P41247 253 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 CCR2P41597 374 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 ALDH1A3P47895 512 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 ACOT2P49753 483 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 EPHB3P54753 998 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 MARSP56192 900 aaKnown RBP8.71□□□□□ -1.02
TRAF3-205ENST00000558700 LILRA4P59901 499 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 CEBPZQ03701 1054 aaKnown RBP8.71□□□□□ -1.02
TRAF3-205ENST00000558700 GPR17Q13304 367 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 SLC44A4Q53GD3 710 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 L1TD1Q5T7N2 865 aaKnown RBP8.71□□□□□ -1.02
TRAF3-205ENST00000558700 C9orf57Q5W0N0 161 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 ARMCX5Q6P1M9 558 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 USP49Q70CQ1 688 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 ZNF720Q7Z2F6 126 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 ITIH5Q86UX2 942 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 NT5DC4Q86YG4 428 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 C1orf210Q8IVY1 113 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 TMEM130Q8N3G9 435 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 DEPDC1BQ8WUY9 529 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 POMGNT1Q8WZA1 660 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 SMARCD2Q92925 531 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 E2F7Q96AV8 911 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 TCEAL4Q96EI5 215 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 SENP8Q96LD8 212 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 ASB16Q96NS5 453 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 PGLYRP2Q96PD5 576 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 ACCSQ96QU6 501 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 USP28Q96RU2 1077 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 GPR88Q9GZN0 384 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 BRD9Q9H8M2 597 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 CEP72Q9P209 647 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 HSFX1Q9UBD0 423 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 MRPS17Q9Y2R5 130 aaKnown RBP8.71□□□□□ -1.02
TRAF3-205ENST00000558700 ASB3Q9Y575 518 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 STYXL1Q9Y6J8 313 aa8.71□□□□□ -1.02
TRAF3-205ENST00000558700 ZFHX2Q9C0A1 2572 aaPredicted RBP8.7□□□□□ -1.02
TRAF3-205ENST00000558700 KIF26AQ9ULI4 1882 aaPredicted RBP8.7□□□□□ -1.02
TRAF3-205ENST00000558700 FAM186AA6NE01 2351 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 ANO9A1A5B4 782 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 MYMKA6NI61 221 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 ANKRD63C9JTQ0 380 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 PIRO00625 290 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 LAMTOR5O43504 91 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 STX6O43752 255 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 LDHAP00338 332 aaKnown RBP8.7□□□□□ -1.02
TRAF3-205ENST00000558700 IDEP14735 1019 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 PSMC3P17980 439 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 NASPP49321 788 aaPredicted RBP8.7□□□□□ -1.02
TRAF3-205ENST00000558700 MMP16P51512 607 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 SMARCB1Q12824 385 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 VEPH1Q14D04 833 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 SLC39A14Q15043 492 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 STK38Q15208 465 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 SV2CQ496J9 727 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 FAM78AQ5JUQ0 283 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 TANGO2Q6ICL3 276 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 FAM173BQ6P4H8 233 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 STXBP4Q6ZWJ1 553 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 METTL23Q86XA0 190 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 TMC8Q8IU68 726 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 BRSK2Q8IWQ3 736 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 SYCP3Q8IZU3 236 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 ZSCAN18Q8TBC5 510 aaPredicted RBP8.7□□□□□ -1.02
TRAF3-205ENST00000558700 IRF7Q92985 503 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 DNAJC19Q96DA6 116 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 MSANTD3Q96H12 275 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 NELL2Q99435 816 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 PYM1Q9BRP8 204 aaKnown RBP8.7□□□□□ -1.02
TRAF3-205ENST00000558700 IER2Q9BTL4 223 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 TRMT61BQ9BVS5 477 aaKnown RBP8.7□□□□□ -1.02
TRAF3-205ENST00000558700 TRPV4Q9HBA0 871 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 SPATA6Q9NWH7 488 aaPredicted RBP8.7□□□□□ -1.02
TRAF3-205ENST00000558700 DPP3Q9NY33 737 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 MTMR6Q9Y217 621 aa8.7□□□□□ -1.02
TRAF3-205ENST00000558700 OBSL1O75147 1896 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 A0A1W2PRU2 124 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 FRMD3A2A2Y4 597 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 FAM170BA6NMN3 283 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 MAN2B1O00754 1011 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 KIAA0391O15091 583 aaKnown RBP8.69□□□□□ -1.02
TRAF3-205ENST00000558700 LRRN2O75325 713 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 VNN2O95498 520 aa8.69□□□□□ -1.02
TRAF3-205ENST00000558700 LMNAP02545 664 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms