RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 TBKBP1A7MCY6 615 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 H0Y8X5 98 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 PRRG2O14669 202 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 IFIT3O14879 490 aaKnown RBP6.86□□□□□ -1.31
ZEB1-211ENST00000558440 ARL4AP40617 200 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 TECP42680 631 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 SARSP49591 514 aaKnown RBP6.86□□□□□ -1.31
ZEB1-211ENST00000558440 GATMP50440 423 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 ZNF445P59923 1031 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 TMEM62Q0P6H9 643 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 SART3Q15020 963 aaKnown RBP6.86□□□□□ -1.31
ZEB1-211ENST00000558440 DUSP6Q16828 381 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 MARCH8Q5T0T0 291 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 CWF19L1Q69YN2 538 aaKnown RBP6.86□□□□□ -1.31
ZEB1-211ENST00000558440 USP17L6PQ6QN14 398 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 TTLL10Q6ZVT0 673 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 CYB5R4Q7L1T6 521 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 RTN4RL1Q86UN2 441 aaPredicted RBP6.86□□□□□ -1.31
ZEB1-211ENST00000558440 ZNF654Q8IZM8 581 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 ATP8B4Q8TF62 1192 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 SUSD6Q92537 303 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 GPRASP2Q96D09 838 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 RIPOR3Q96MK2 946 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 SLC12A9Q9BXP2 914 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 LNPKQ9C0E8 428 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 AZI2Q9H6S1 392 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 TMEM260Q9NX78 707 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 SIRT5Q9NXA8 310 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 SEC63Q9UGP8 760 aaKnown RBP6.86□□□□□ -1.31
ZEB1-211ENST00000558440 ACSL6Q9UKU0 697 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 PADI3Q9ULW8 664 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 NR2E1Q9Y466 385 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 KCTD3Q9Y597 815 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 PCDHB7Q9Y5E2 793 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 FHOD1Q9Y613 1164 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 C2orf16Q68DN1 1984 aa6.86□□□□□ -1.31
ZEB1-211ENST00000558440 DENND4AQ7Z401 1863 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 NCANO14594 1321 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 IGSF9BQ9UPX0 1349 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 DENND3A2RUS2 1198 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 PROB1E7EW31 1015 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 ABLIM1O14639 778 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 CYTH3O43739 400 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 ATP9AO75110 1047 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 FGF18O76093 207 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 PDGFBP01127 241 aaPredicted RBP6.85□□□□□ -1.31
ZEB1-211ENST00000558440 GSTM1P09488 218 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 INSRRP14616 1297 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 KCNA2P16389 499 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 PRKCAP17252 672 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 SP100P23497 879 aaPredicted RBP6.85□□□□□ -1.31
ZEB1-211ENST00000558440 RBM10P98175 930 aaKnown RBP6.85□□□□□ -1.31
ZEB1-211ENST00000558440 HDAC1Q13547 482 aaPredicted RBP6.85□□□□□ -1.31
ZEB1-211ENST00000558440 MTMR1Q13613 665 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 SSPNQ14714 243 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 WTAPQ15007 396 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 TMEM266Q2M3C6 531 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 SLC35G1Q2M3R5 365 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 ZNF385BQ569K4 471 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 ODR4Q5SWX8 454 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 PLPP4Q5VZY2 271 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 ANKRD54Q6NXT1 300 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 FAM43BQ6ZT52 329 aaPredicted RBP6.85□□□□□ -1.31
ZEB1-211ENST00000558440 CATIPQ7Z7H3 387 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 RALYLQ86SE5 291 aaKnown RBP6.85□□□□□ -1.31
ZEB1-211ENST00000558440 UBALD2Q8IYN6 164 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 NME8Q8N427 588 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 KREMEN2Q8NCW0 462 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 NUP43Q8NFH3 380 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 VN1R2Q8NFZ6 395 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 ZBTB10Q96DT7 871 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 RRP36Q96EU6 259 aaKnown RBP6.85□□□□□ -1.31
ZEB1-211ENST00000558440 APOL5Q9BWW9 433 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 SRRTQ9BXP5 876 aaKnown RBP6.85□□□□□ -1.31
ZEB1-211ENST00000558440 CELF4Q9BZC1 486 aaKnown RBP6.85□□□□□ -1.31
ZEB1-211ENST00000558440 CNTD2Q9H8S5 307 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 TNFRSF12AQ9NP84 129 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 ENTPD7Q9NQZ7 604 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 PUF60Q9UHX1 559 aaKnown RBP6.85□□□□□ -1.31
ZEB1-211ENST00000558440 PCDHA2Q9Y5H9 948 aa6.85□□□□□ -1.31
ZEB1-211ENST00000558440 SPTBN2O15020 2390 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 NCOR2Q9Y618 2525 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 KDM3AQ9Y4C1 1321 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 PRR23AA6NEV1 266 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 B8ZZF3 427 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 MEIS2O14770 477 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 RPS6KA5O75582 802 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 TP53P04637 393 aaPredicted RBP6.84□□□□□ -1.31
ZEB1-211ENST00000558440 MPOP05164 745 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 HOXB8P17481 243 aaPredicted RBP6.84□□□□□ -1.31
ZEB1-211ENST00000558440 LAG3P18627 525 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 CD247P20963 164 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 NBL1P41271 181 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 EPHB3P54753 998 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 CYP4F8P98187 520 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 TROAPQ12815 778 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 MCTP2Q6DN12 878 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 CES5AQ6NT32 575 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 TMEM184AQ6ZMB5 413 aa6.84□□□□□ -1.31
ZEB1-211ENST00000558440 CCDC81Q6ZN84 652 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms