RNA–Protein interactions for RNA: ENST00000558338.1

VPS13C-206, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 1,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-206ENST00000558338 INTS9Q9NV88 658 aaKnown RBP7.69□□□□□ -1.18
VPS13C-206ENST00000558338 CPSF3Q9UKF6 684 aaKnown RBP7.69□□□□□ -1.18
VPS13C-206ENST00000558338 ANKRD33BA6NCL7 494 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 TMEM191CA6NGB0 347 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 ACKR2O00590 384 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 FAM189A1O60320 539 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 HBP1O60381 514 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 TTC4O95801 387 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 KRT1P04264 644 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 NUDT7P0C024 238 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 CHN1P15882 459 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 OSBPP22059 807 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 TMOD1P28289 359 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 NF2P35240 595 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 GSCP56915 257 aaPredicted RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 TNFAIP2Q03169 654 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 NFX1Q12986 1120 aaKnown RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 KCTD2Q14681 263 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 STAT4Q14765 748 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 EAPPQ56P03 285 aaPredicted RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 ZBTB41Q5SVQ8 909 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 CELF3Q5SZQ8 465 aaKnown RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 DCUN1D2Q6PH85 259 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 C6orf89Q6UWU4 347 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 TSHZ1Q6ZSZ6 1077 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 POLNQ7Z5Q5 900 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 APBB1IPQ7Z5R6 666 aaPredicted RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 ERO1BQ86YB8 467 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 RNF149Q8NC42 400 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 GTF3C2Q8WUA4 911 aaPredicted RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 SEC16BQ96JE7 1060 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 CABS1Q96KC9 395 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 GPR20Q99678 358 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 NFKBIZQ9BYH8 718 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 TRIM7Q9C029 511 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 MTMR12Q9C0I1 747 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 SMARCAD1Q9H4L7 1026 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 FAM124BQ9H5Z6 455 aaPredicted RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 CISHQ9NSE2 258 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 WDR35Q9P2L0 1181 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 FZD1Q9UP38 647 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 AGTPBP1Q9UPW5 1226 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 SMIM23A6NLE4 172 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 DCDC2CA8MYV0 355 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 H0YHG0 523 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 PARNO95453 639 aaKnown RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 EDN1P05305 212 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 P4HA1P13674 534 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 DRD4P21917 467 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 PROZP22891 400 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 IVDP26440 423 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 LIG3P49916 1009 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 HIRAP54198 1017 aaPredicted RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 TAS2R40P59535 323 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 POU5F1BQ06416 359 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 NR1H3Q13133 447 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 AUHQ13825 339 aaKnown RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 ITIH4Q14624 930 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 ZFYVE27Q5T4F4 411 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 RNF187Q5TA31 235 aaPredicted RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 ATF7IP2Q5U623 682 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 IZUMO3Q5VZ72 239 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 EGFLAMQ63HQ2 1017 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 PPP2R2DQ66LE6 453 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 GSTA5Q7RTV2 222 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 ZBTB33Q86T24 672 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 ZCCHC9Q8N567 271 aaKnown RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 TTC39CQ8N584 583 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 CCDC197Q8NCU1 140 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 EPS8L3Q8TE67 593 aaKnown RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 FNIP1Q8TF40 1166 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 ATG4AQ8WYN0 398 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 ELMO3Q96BJ8 720 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 CFAP57Q96MR6 1250 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 SLITRK1Q96PX8 696 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 PHOX2BQ99453 314 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 MMP19Q99542 508 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 PHACTR1Q9C0D0 580 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 MIS12Q9H081 205 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 LHX5Q9H2C1 402 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 MROH8Q9H579 483 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 PRMT7Q9NVM4 692 aaPredicted RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 SAMD15Q9P1V8 674 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 DDX20Q9UHI6 824 aaKnown RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 LGALS13Q9UHV8 139 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 DRG1Q9Y295 367 aaKnown RBP7.68□□□□□ -1.18
VPS13C-206ENST00000558338 EFR3BQ9Y2G0 817 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 NEU2Q9Y3R4 380 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 ACTL7BQ9Y614 415 aa7.68□□□□□ -1.18
VPS13C-206ENST00000558338 ASB14A6NK59 587 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 ABLIM1O14639 778 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 LIASO43766 372 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 CDH16O75309 829 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 ACSL3O95573 720 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 CALCAP01258 141 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 KRT7P08729 469 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 HOXC6P09630 235 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 SRGAP2CP0DJJ0 459 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 GHRP10912 638 aa7.67□□□□□ -1.18
VPS13C-206ENST00000558338 CD58P19256 250 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms