RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 DSC1Q08554 894 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 STRN3Q13033 797 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 BTG3Q14201 252 aaPredicted RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 ZNF268Q14587 947 aaPredicted RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 LBRQ14739 615 aaKnown RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 MTF1Q14872 753 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 ATF7IP2Q5U623 682 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 MPZL3Q6UWV2 235 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 MAEAQ7L5Y9 396 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 HAUS6Q7Z4H7 955 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 CPLX4Q7Z7G2 160 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 CCDC65Q8IXS2 484 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 ABI1Q8IZP0 508 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 CCDC63Q8NA47 563 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 ACRBPQ8NEB7 543 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 GSTCDQ8NEC7 633 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 FBXO22Q8NEZ5 403 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 ZNF668Q96K58 619 aaPredicted RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 CCDC42Q96M95 316 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 RAB3IPQ96QF0 476 aaPredicted RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 TMEM175Q9BSA9 504 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 KIFC3Q9BVG8 833 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 FAM129AQ9BZQ8 928 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 CWH43Q9H720 699 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 RSAD1Q9HA92 442 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 NOD2Q9HC29 1040 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 AAASQ9NRG9 546 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 SAMSN1Q9NSI8 373 aaKnown RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 CHCHD3Q9NX63 227 aaKnown RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 MTUS1Q9ULD2 1270 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 TPX2Q9ULW0 747 aaKnown RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 TBX20Q9UMR3 447 aa8.54□□□□□ -1.04
RTF1-205ENST00000558298 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.54□□□□□ -1.04
RTF1-205ENST00000558298 LRRD1A4D1F6 860 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 CCDC169A6NNP5 214 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 KCNJ18B7U540 433 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 K7ENM7 598 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 PSMA7O14818 248 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 SLC16A4O15374 487 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 PJA2O43164 708 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 SART1O43290 800 aaKnown RBP8.53□□□□□ -1.04
RTF1-205ENST00000558298 GTPBP6O43824 516 aaPredicted RBP8.53□□□□□ -1.04
RTF1-205ENST00000558298 LCA5LO95447 670 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 ATP1A1P05023 1023 aaKnown RBP8.53□□□□□ -1.04
RTF1-205ENST00000558298 KRT18P05783 430 aaKnown RBP8.53□□□□□ -1.04
RTF1-205ENST00000558298 IGFBP4P22692 258 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 ANXA13P27216 316 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 PPP2R2AP63151 447 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 UBXN1Q04323 297 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 COASYQ13057 564 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 BLMHQ13867 455 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 KCNJ12Q14500 433 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 KRT31Q15323 416 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 SGSM1Q2NKQ1 1148 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 TTMPQ5BVD1 217 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 NOMO2Q5JPE7 1267 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 FKBP15Q5T1M5 1219 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 C10orf76Q5T2E6 689 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 ZNF658Q5TYW1 1059 aaPredicted RBP8.53□□□□□ -1.04
RTF1-205ENST00000558298 SLFN12LQ6IEE8 588 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 PDE12Q6L8Q7 609 aaKnown RBP8.53□□□□□ -1.04
RTF1-205ENST00000558298 FOXR2Q6PJQ5 311 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 ALKAL1Q6UXT8 129 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 STXBP4Q6ZWJ1 553 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 EPM2AIP1Q7L775 607 aaPredicted RBP8.53□□□□□ -1.04
RTF1-205ENST00000558298 CREG2Q8IUH2 290 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 RNF168Q8IYW5 571 aaPredicted RBP8.53□□□□□ -1.04
RTF1-205ENST00000558298 URGCPQ8TCY9 931 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 ATXN2LQ8WWM7 1075 aaKnown RBP8.53□□□□□ -1.04
RTF1-205ENST00000558298 PPP1R14BQ96C90 147 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 MRPL38Q96DV4 380 aaKnown RBP8.53□□□□□ -1.04
RTF1-205ENST00000558298 SEC16BQ96JE7 1060 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 ZIM3Q96PE6 472 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 NOX5Q96PH1 765 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 PLIN2Q99541 437 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 TSC22D3Q99576 134 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 COL25A1Q9BXS0 654 aaPredicted RBP8.53□□□□□ -1.04
RTF1-205ENST00000558298 EIF2AQ9BY44 585 aaKnown RBP8.53□□□□□ -1.04
RTF1-205ENST00000558298 CDT1Q9H211 546 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 PLEKHA4Q9H4M7 779 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 TMEM206Q9H813 350 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 PLEKHA5Q9HAU0 1116 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 TMBIM4Q9HC24 238 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 TBC1D13Q9NVG8 400 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 THEGQ9P2T0 379 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 HCSTQ9UBK5 93 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 PCDHB13Q9Y5F0 798 aa8.53□□□□□ -1.04
RTF1-205ENST00000558298 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.52□□□□□ -1.05
RTF1-205ENST00000558298 A0A0B4J269 797 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 NPHP3-ACAD11A0A0J9YXS1 232 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 CCT8L1PA6NM43 557 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 TTLL13PA6NNM8 815 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 CCDC188H7C350 402 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 TMEM189-UBE2V1I3L0A0 370 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 O00370 1275 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 GRM6O15303 877 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 HNRNPCL1O60812 293 aaKnown RBP8.52□□□□□ -1.05
RTF1-205ENST00000558298 SMNDC1O75940 238 aaKnown RBP eCLIP8.52□□□□□ -1.05
RTF1-205ENST00000558298 NPTXRO95502 500 aa8.52□□□□□ -1.05
RTF1-205ENST00000558298 C1RP00736 705 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms