RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CACTINQ8WUQ7 758 aaKnown RBP2.1□□□□□ -2.07
HIF1A-212ENST00000557538 C20orf173Q96LM9 149 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 COQ10AQ96MF6 247 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 NUDT22Q9BRQ3 303 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 ZBTB26Q9HCK0 441 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 SHOC2Q9UQ13 582 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 ATP11BQ9Y2G3 1177 aa2.1□□□□□ -2.07
HIF1A-212ENST00000557538 PRAMEF33A0A0G2JMD5 474 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 A0A1B0GTW7 788 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 AHRRA9YTQ3 701 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 PRAMEF10O60809 474 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 SUN1O94901 812 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 AHSGP02765 367 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 GRPP07492 148 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 TGM1P22735 817 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 TNFSF4P23510 183 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 ZFP36P26651 326 aaKnown RBP2.09□□□□□ -2.07
HIF1A-212ENST00000557538 PPM1AP35813 382 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 DGKEP52429 567 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 CHN2P52757 468 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 OCA2Q04671 838 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 CTBP1Q13363 440 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 DYRK1AQ13627 763 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 ICAM4Q14773 271 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 MPEG1Q2M385 716 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 FAM214AQ32MH5 1076 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 ZNF750Q32MQ0 723 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 C4orf46Q504U0 113 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 UTP14CQ5TAP6 766 aaKnown RBP2.09□□□□□ -2.07
HIF1A-212ENST00000557538 B3GNTL1Q67FW5 361 aaPredicted RBP2.09□□□□□ -2.07
HIF1A-212ENST00000557538 HIBCHQ6NVY1 386 aaPredicted RBP2.09□□□□□ -2.07
HIF1A-212ENST00000557538 SRLQ86TD4 932 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 GSPT2Q8IYD1 628 aaKnown RBP2.09□□□□□ -2.07
HIF1A-212ENST00000557538 ZNF808Q8N4W9 903 aaPredicted RBP2.09□□□□□ -2.07
HIF1A-212ENST00000557538 STON2Q8WXE9 905 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 SLC9A6Q92581 669 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 DVL3Q92997 716 aaPredicted RBP2.09□□□□□ -2.07
HIF1A-212ENST00000557538 NT5C1BQ96P26 610 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 MYOCQ99972 504 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 VPS51Q9UID3 782 aa2.09□□□□□ -2.07
HIF1A-212ENST00000557538 PIPSLA2A3N6 862 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 CAPN14A8MX76 684 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 F8W8V4 182 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 AGFG2O95081 481 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 EEF1GP26641 437 aaKnown RBP2.09□□□□□ -2.08
HIF1A-212ENST00000557538 ACVR2AP27037 513 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 IL1R2P27930 398 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 IL6STP40189 918 aaPredicted RBP2.09□□□□□ -2.08
HIF1A-212ENST00000557538 HSPA7P48741 367 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 VAV2P52735 878 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 NOMO3P69849 1222 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 NHLH2Q02577 135 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 TNFAIP2Q03169 654 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 ACAP1Q15027 740 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 PRKD1Q15139 912 aaPredicted RBP2.09□□□□□ -2.08
HIF1A-212ENST00000557538 PTPRRQ15256 657 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 NRN1LQ496H8 165 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 CRB2Q5IJ48 1285 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 NOMO2Q5JPE7 1267 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 TMEM63BQ5T3F8 832 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 FCRL6Q6DN72 434 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 GDF7Q7Z4P5 450 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 COL23A1Q86Y22 540 aaPredicted RBP2.09□□□□□ -2.08
HIF1A-212ENST00000557538 PDPRQ8NCN5 879 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 ZNF503Q96F45 646 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 P2RX7Q99572 595 aaKnown RBP2.09□□□□□ -2.08
HIF1A-212ENST00000557538 SMOQ99835 787 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 ZCCHC4Q9H5U6 513 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 SLC45A2Q9UMX9 530 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 GABRQQ9UN88 632 aa2.09□□□□□ -2.08
HIF1A-212ENST00000557538 K7ESM1 405 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 SYT5O00445 386 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 PARP1P09874 1014 aaKnown RBP2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ZNF20P17024 532 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 BMP7P18075 431 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 KCNA3P22001 575 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 SLC6A2P23975 617 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ADAM17P78536 824 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ZNF844Q08AG5 666 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 IQCB1Q15051 598 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 SLC5A9Q2M3M2 681 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ABHD17BQ5VST6 288 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 PLAG1Q6DJT9 500 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 PPP4R4Q6NUP7 873 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 Q6ZRM9 215 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 TSHZ1Q6ZSZ6 1077 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 CERS3Q8IU89 383 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 DNAJC5GQ8N7S2 189 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 ACRBPQ8NEB7 543 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 OR56A3Q8NH54 315 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 LINC00476Q8WZB0 136 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 SPSB4Q96A44 273 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 NACC2Q96BF6 587 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 LRIG1Q96JA1 1093 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 SNX27Q96L92 541 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 GNRHR2Q96P88 292 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 PTDSS2Q9BVG9 487 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 GPR87Q9BY21 358 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 KRTAP4-11Q9BYQ6 195 aa2.08□□□□□ -2.08
HIF1A-212ENST00000557538 MYH16Q9H6N6 1097 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms