RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 SNAPC2Q13487 334 aa3.43□□□□□ -1.86
FOXN3-216ENST00000557496 TBCCQ15814 346 aa3.43□□□□□ -1.86
FOXN3-216ENST00000557496 KHDC1Q4VXA5 237 aaKnown RBP3.43□□□□□ -1.86
FOXN3-216ENST00000557496 VPS53Q5VIR6 699 aa3.43□□□□□ -1.86
FOXN3-216ENST00000557496 PPP1R32Q7Z5V6 425 aa3.43□□□□□ -1.86
FOXN3-216ENST00000557496 TTC7BQ86TV6 843 aa3.43□□□□□ -1.86
FOXN3-216ENST00000557496 KLHDC4Q8TBB5 520 aa3.43□□□□□ -1.86
FOXN3-216ENST00000557496 ATRIPQ8WXE1 791 aa3.43□□□□□ -1.86
FOXN3-216ENST00000557496 TBC1D5Q92609 795 aa3.43□□□□□ -1.86
FOXN3-216ENST00000557496 ZBTB9Q96C00 473 aa3.43□□□□□ -1.86
FOXN3-216ENST00000557496 FAM136AQ96C01 138 aa3.43□□□□□ -1.86
FOXN3-216ENST00000557496 FCRL4Q96PJ5 515 aa3.43□□□□□ -1.86
FOXN3-216ENST00000557496 NRIP3Q9NQ35 241 aa3.43□□□□□ -1.86
FOXN3-216ENST00000557496 SERHLQ9NQF3 203 aa3.43□□□□□ -1.86
FOXN3-216ENST00000557496 GNL3LQ9NVN8 582 aaKnown RBP3.43□□□□□ -1.86
FOXN3-216ENST00000557496 CFAP97Q9P2B7 532 aa3.43□□□□□ -1.86
FOXN3-216ENST00000557496 TISP43B9A030 160 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 IKBKBO14920 756 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 XPOTO43592 962 aaKnown RBP3.42□□□□□ -1.86
FOXN3-216ENST00000557496 MOSPD3O75425 235 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 JTBO76095 146 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 BMP15O95972 392 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 IGKV2-30P06310 120 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 RARBP10826 455 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 NDUFB7P17568 137 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 CHRM3P20309 590 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 MPGP29372 298 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 CD6P30203 668 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 PIK3CGP48736 1102 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 ABCB5Q2M3G0 1257 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 ZNF618Q5T7W0 954 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 TEDDM1Q5T9Z0 273 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 SYDE2Q5VT97 1194 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 SLC29A4Q7RTT9 530 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 YTHDF3Q7Z739 585 aaKnown RBP3.42□□□□□ -1.86
FOXN3-216ENST00000557496 DDX42Q86XP3 938 aaKnown RBP eCLIP3.42□□□□□ -1.86
FOXN3-216ENST00000557496 FAM90A1Q86YD7 464 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 TINAGL1Q9GZM7 467 aaPredicted RBP3.42□□□□□ -1.86
FOXN3-216ENST00000557496 BHMT2Q9H2M3 363 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 TMX1Q9H3N1 280 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 ARHGEF3Q9NR81 526 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 SH3BP4Q9P0V3 963 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 AGAP1Q9UPQ3 857 aa3.42□□□□□ -1.86
FOXN3-216ENST00000557496 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 H0YIZ8 118 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 MYO1FO00160 1098 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 PPP6CO00743 305 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 CLSTN1O94985 981 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 KIF20AO95235 890 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 PDHA1P08559 390 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 FTH1P19P0C7X4 201 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 MYBL2P10244 700 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 PRDX5P30044 214 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 KIF22Q14807 665 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 UAP1L1Q3KQV9 507 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 SUPT20HL1Q3ZLR7 823 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 AARS2Q5JTZ9 985 aaKnown RBP3.41□□□□□ -1.86
FOXN3-216ENST00000557496 PRAMEF17Q5VTA0 474 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 ANKRD16Q6P6B7 361 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 C1orf43Q9BWL3 253 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 SIK2Q9H0K1 926 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 TRHDEQ9UKU6 1024 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 TBC1D30Q9Y2I9 924 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 ZNF521Q96K83 1311 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 KAT6AQ92794 2004 aa3.41□□□□□ -1.86
FOXN3-216ENST00000557496 LRRC14BA6NHZ5 514 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 PPM1DO15297 605 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 VPS4BO75351 444 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 TOP3BO95985 862 aaKnown RBP3.4□□□□□ -1.87
FOXN3-216ENST00000557496 TUBB4AP04350 444 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 FAM163BP0C2L3 166 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 SFPQP23246 707 aaKnown RBP eCLIP3.4□□□□□ -1.87
FOXN3-216ENST00000557496 PHKA1P46020 1223 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 GCLCP48506 637 aaPredicted RBP3.4□□□□□ -1.87
FOXN3-216ENST00000557496 ADKP55263 362 aaKnown RBP3.4□□□□□ -1.87
FOXN3-216ENST00000557496 MTMR1Q13613 665 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 PCBP2Q15366 365 aaKnown RBP eCLIP3.4□□□□□ -1.87
FOXN3-216ENST00000557496 CEP78Q5JTW2 689 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 SLC9A4Q6AI14 798 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 SLC18B1Q6NT16 456 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 MAVSQ7Z434 540 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 ZNF804AQ7Z570 1209 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 DTX2Q86UW9 622 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 SH2D3AQ9BRG2 576 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 QTRT1Q9BXR0 403 aaKnown RBP3.4□□□□□ -1.87
FOXN3-216ENST00000557496 SLAMF7Q9NQ25 335 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 ATP8A1Q9Y2Q0 1164 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 MRFAP1Q9Y605 127 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 RAD54BQ9Y620 910 aa3.4□□□□□ -1.87
FOXN3-216ENST00000557496 SHTN1A0MZ66 631 aa3.39□□□□□ -1.87
FOXN3-216ENST00000557496 SMIM22K7EJ46 135 aa3.39□□□□□ -1.87
FOXN3-216ENST00000557496 TRIM38O00635 465 aa3.39□□□□□ -1.87
FOXN3-216ENST00000557496 GABRDO14764 452 aa3.39□□□□□ -1.87
FOXN3-216ENST00000557496 ADAMTS3O15072 1205 aa3.39□□□□□ -1.87
FOXN3-216ENST00000557496 CYP2D6P10635 497 aa3.39□□□□□ -1.87
FOXN3-216ENST00000557496 HOXB6P17509 224 aaKnown RBP3.39□□□□□ -1.87
FOXN3-216ENST00000557496 SMARCA1P28370 1054 aa3.39□□□□□ -1.87
FOXN3-216ENST00000557496 CLCN2P51788 898 aa3.39□□□□□ -1.87
FOXN3-216ENST00000557496 EEFSECP57772 596 aaKnown RBP3.39□□□□□ -1.87
FOXN3-216ENST00000557496 BOP1Q14137 746 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms